RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 STK17AQ9UEE5 414 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 ODF2LQ9ULJ1 636 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 PLAGL2Q9UPG8 496 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 RBM19Q9Y4C8 960 aaKnown RBP10.17□□□□□ -0.78
SNHG1-215ENST00000540904 IPPQ9Y573 584 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 PCDHB12Q9Y5F1 795 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 PHLPP2Q6ZVD8 1323 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 N4BP3O15049 544 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 GRM6O15303 877 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 OFD1O75665 1012 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 FAM13AO94988 1023 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 EDN1P05305 212 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 ITGA4P13612 1032 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 LAG3P18627 525 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 POU3F3P20264 500 aaPredicted RBP10.16□□□□□ -0.78
SNHG1-215ENST00000540904 AKAP5P24588 427 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 PBX3P40426 434 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 AFF1P51825 1210 aaKnown RBP10.16□□□□□ -0.78
SNHG1-215ENST00000540904 SMTNP53814 917 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 RNASELQ05823 741 aaKnown RBP10.16□□□□□ -0.78
SNHG1-215ENST00000540904 GIT2Q14161 759 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 SKIV2LQ15477 1246 aaKnown RBP10.16□□□□□ -0.78
SNHG1-215ENST00000540904 NAALADL2Q58DX5 795 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 ATF7IP2Q5U623 682 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 SHC4Q6S5L8 630 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 SV2BQ7L1I2 683 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 DYMQ7RTS9 669 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 THNSL1Q8IYQ7 743 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 HACE1Q8IYU2 909 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 MYCT1Q8N699 235 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 KLHL23Q8NBE8 558 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 COLGALT1Q8NBJ5 622 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 URGCPQ8TCY9 931 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 SPIRE2Q8WWL2 714 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 MRPL38Q96DV4 380 aaKnown RBP10.16□□□□□ -0.78
SNHG1-215ENST00000540904 ADPGKQ9BRR6 497 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 NTPCRQ9BSD7 190 aaKnown RBP10.16□□□□□ -0.78
SNHG1-215ENST00000540904 MRPL9Q9BYD2 267 aaKnown RBP10.16□□□□□ -0.78
SNHG1-215ENST00000540904 PDZD7Q9H5P4 517 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 LMCD1Q9NZU5 365 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 LARSQ9P2J5 1176 aaKnown RBP10.16□□□□□ -0.78
SNHG1-215ENST00000540904 ARHGAP28Q9P2N2 729 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 KCNG1Q9UIX4 513 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 PCDHA7Q9UN72 937 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 ATP6V1DQ9Y5K8 247 aa10.16□□□□□ -0.78
SNHG1-215ENST00000540904 ZC3H11AO75152 810 aaKnown RBP eCLIP10.15□□□□□ -0.78
SNHG1-215ENST00000540904 TBCAO75347 108 aaKnown RBP10.15□□□□□ -0.78
SNHG1-215ENST00000540904 ITGB1P05556 798 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 MLH1P40692 756 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 ALDH7A1P49419 539 aaKnown RBP10.15□□□□□ -0.78
SNHG1-215ENST00000540904 KRT85P78386 507 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 STRN3Q13033 797 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 AXDND1Q5T1B0 1012 aaPredicted RBP10.15□□□□□ -0.78
SNHG1-215ENST00000540904 NT5DC1Q5TFE4 455 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 EEF1DP3Q658K8 133 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 KCNT2Q6UVM3 1135 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 TAS1R3Q7RTX0 852 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 TMEM161BQ8NDZ6 487 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 RSPH1Q8WYR4 309 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 DDX12PQ92771 950 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 P2RX5Q93086 422 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 DHX58Q96C10 678 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 SPATA32Q96LK8 384 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 ZNF558Q96NG5 402 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 GAD1Q99259 594 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 TARS2Q9BW92 718 aaKnown RBP10.15□□□□□ -0.78
SNHG1-215ENST00000540904 MRPL4Q9BYD3 311 aaKnown RBP10.15□□□□□ -0.78
SNHG1-215ENST00000540904 GBP3Q9H0R5 595 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 TMEM134Q9H6X4 195 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 PARVGQ9HBI0 331 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 UBN1Q9NPG3 1134 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 TBC1D13Q9NVG8 400 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 PARP2Q9UGN5 583 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 RCOR1Q9UKL0 485 aa10.15□□□□□ -0.78
SNHG1-215ENST00000540904 ARL5CA6NH57 179 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 MYMKA6NI61 221 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 NT5C1B-RDH14C9J2C7 533 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 H0YCG3 227 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 TRAK2O60296 914 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 FGF18O76093 207 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 POMCP01189 267 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 MAPTP10636 758 aaKnown RBP10.14□□□□□ -0.79
SNHG1-215ENST00000540904 DNAJB1P25685 340 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 ZNF131P52739 623 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 BCAR1P56945 870 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 CSPP1Q1MSJ5 1256 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 HAUS6Q7Z4H7 955 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 APBB1IPQ7Z5R6 666 aaPredicted RBP10.14□□□□□ -0.79
SNHG1-215ENST00000540904 ZNF280BQ86YH2 543 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 FAM178BQ8IXR5 827 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 SPPL3Q8TCT6 385 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 LEO1Q8WVC0 666 aaPredicted RBP10.14□□□□□ -0.79
SNHG1-215ENST00000540904 POF1BQ8WVV4 589 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 ZFP42Q96MM3 310 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 ACO2Q99798 780 aaKnown RBP10.14□□□□□ -0.79
SNHG1-215ENST00000540904 LMAN2LQ9H0V9 348 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 NRDE2Q9H7Z3 1164 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 PRDM6Q9NQX0 595 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 FAM13BQ9NYF5 915 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 SPG21Q9NZD8 308 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms