RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ITGA4P13612 1032 aa18.62■□□□□ 0.57
CD9-209ENST00000540891 PLS3P13797 630 aa18.62■□□□□ 0.57
CD9-209ENST00000540891 DDIT3P35638 169 aa18.62■□□□□ 0.57
CD9-209ENST00000540891 EEF1DP3Q658K8 133 aa18.62■□□□□ 0.57
CD9-209ENST00000540891 KCNT2Q6UVM3 1135 aa18.62■□□□□ 0.57
CD9-209ENST00000540891 SLC17A8Q8NDX2 589 aa18.62■□□□□ 0.57
CD9-209ENST00000540891 POF1BQ8WVV4 589 aa18.62■□□□□ 0.57
CD9-209ENST00000540891 SPIRE2Q8WWL2 714 aa18.62■□□□□ 0.57
CD9-209ENST00000540891 TMEM134Q9H6X4 195 aa18.62■□□□□ 0.57
CD9-209ENST00000540891 KMT5AQ9NQR1 393 aa18.62■□□□□ 0.57
CD9-209ENST00000540891 DAXXQ9UER7 740 aaPredicted RBP18.62■□□□□ 0.57
CD9-209ENST00000540891 CCDC39Q9UFE4 941 aa18.62■□□□□ 0.57
CD9-209ENST00000540891 PHLPP2Q6ZVD8 1323 aa18.62■□□□□ 0.57
CD9-209ENST00000540891 PLXNA4Q9HCM2 1894 aa18.61■□□□□ 0.57
CD9-209ENST00000540891 K7ERI5 159 aa18.61■□□□□ 0.57
CD9-209ENST00000540891 INPPL1O15357 1258 aa18.61■□□□□ 0.57
CD9-209ENST00000540891 SLC16A4O15374 487 aa18.61■□□□□ 0.57
CD9-209ENST00000540891 FGF18O76093 207 aa18.61■□□□□ 0.57
CD9-209ENST00000540891 IRS1P35568 1242 aa18.61■□□□□ 0.57
CD9-209ENST00000540891 DNM1Q05193 864 aaKnown RBP18.61■□□□□ 0.57
CD9-209ENST00000540891 GIT2Q14161 759 aa18.61■□□□□ 0.57
CD9-209ENST00000540891 NRDE2Q9H7Z3 1164 aa18.61■□□□□ 0.57
CD9-209ENST00000540891 STK17AQ9UEE5 414 aa18.61■□□□□ 0.57
CD9-209ENST00000540891 ODF2LQ9ULJ1 636 aa18.61■□□□□ 0.57
CD9-209ENST00000540891 UNC80Q8N2C7 3258 aa18.61■□□□□ 0.57
CD9-209ENST00000540891 N4BP3O15049 544 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 CSPG5O95196 566 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 AKAP5P24588 427 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 TXLNAP40222 546 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 MLH1P40692 756 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 ZNF131P52739 623 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 BCAR1P56945 870 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 PLCB3Q01970 1234 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 CSPP1Q1MSJ5 1256 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 TIGD5Q53EQ6 642 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 TCEAL5Q5H9L2 206 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 AXDND1Q5T1B0 1012 aaPredicted RBP18.6■□□□□ 0.57
CD9-209ENST00000540891 RRAGBQ5VZM2 374 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 ZNF280BQ86YH2 543 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 THNSL1Q8IYQ7 743 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 SLC39A11Q8N1S5 342 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 TMEM161BQ8NDZ6 487 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 GSTCDQ8NEC7 633 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 CHAMP1Q96JM3 812 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 ZNF558Q96NG5 402 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 GAD1Q99259 594 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 APOL6Q9BWW8 343 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 TRIM6Q9C030 488 aaPredicted RBP18.6■□□□□ 0.57
CD9-209ENST00000540891 UBN1Q9NPG3 1134 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 MIOSQ9NXC5 875 aa18.6■□□□□ 0.57
CD9-209ENST00000540891 RBM19Q9Y4C8 960 aaKnown RBP18.6■□□□□ 0.57
CD9-209ENST00000540891 ARL5CA6NH57 179 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 NT5C1B-RDH14C9J2C7 533 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 DDHD2O94830 711 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 NCKAP1LP55160 1127 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 UBE3AQ05086 875 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 ATF7IP2Q5U623 682 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 ATL3Q6DD88 541 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 SHC4Q6S5L8 630 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 TMEM173Q86WV6 379 aaPredicted RBP18.59■□□□□ 0.57
CD9-209ENST00000540891 ZFP42Q96MM3 310 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 FIZ1Q96SL8 496 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 PANK2Q9BZ23 570 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 NSUN3Q9H649 340 aaKnown RBP18.59■□□□□ 0.57
CD9-209ENST00000540891 PTPRHQ9HD43 1115 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 DNAJB4Q9UDY4 337 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 TNFSF13BQ9Y275 285 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 GIT1Q9Y2X7 761 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 PCDHGC5Q9Y5F6 944 aa18.59■□□□□ 0.57
CD9-209ENST00000540891 SPTBN5Q9NRC6 3674 aaKnown RBP18.59■□□□□ 0.57
CD9-209ENST00000540891 CUTAO60888 179 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 ZC3H11AO75152 810 aaKnown RBP eCLIP18.58■□□□□ 0.56
CD9-209ENST00000540891 POMCP01189 267 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 GALTP07902 379 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 MAPTP10636 758 aaKnown RBP18.58■□□□□ 0.56
CD9-209ENST00000540891 ERVFC1P60507 584 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 BECN1Q14457 450 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 SKIV2LQ15477 1246 aaKnown RBP18.58■□□□□ 0.56
CD9-209ENST00000540891 TMEM132AQ24JP5 1023 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 CCDC73Q6ZRK6 1079 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 URGCPQ8TCY9 931 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 KCNG4Q8TDN1 519 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 BCL7CQ8WUZ0 217 aaPredicted RBP18.58■□□□□ 0.56
CD9-209ENST00000540891 MRPS27Q92552 414 aaKnown RBP18.58■□□□□ 0.56
CD9-209ENST00000540891 KCNN1Q92952 543 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 ACO2Q99798 780 aaKnown RBP18.58■□□□□ 0.56
CD9-209ENST00000540891 TARS2Q9BW92 718 aaKnown RBP18.58■□□□□ 0.56
CD9-209ENST00000540891 SNTG2Q9NY99 539 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 LARSQ9P2J5 1176 aaKnown RBP18.58■□□□□ 0.56
CD9-209ENST00000540891 KANSL3Q9P2N6 904 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 THEGQ9P2T0 379 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 RCOR1Q9UKL0 485 aa18.58■□□□□ 0.56
CD9-209ENST00000540891 MYMKA6NI61 221 aa18.57■□□□□ 0.56
CD9-209ENST00000540891 ABLIM1O14639 778 aa18.57■□□□□ 0.56
CD9-209ENST00000540891 FSCN2O14926 492 aa18.57■□□□□ 0.56
CD9-209ENST00000540891 FAM13AO94988 1023 aa18.57■□□□□ 0.56
CD9-209ENST00000540891 PROZP22891 400 aa18.57■□□□□ 0.56
CD9-209ENST00000540891 PPM1AP35813 382 aa18.57■□□□□ 0.56
CD9-209ENST00000540891 SLC11A1P49279 550 aa18.57■□□□□ 0.56
CD9-209ENST00000540891 SCNN1GP51170 649 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms