RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	RDM1	Q8NG50	284 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	WHAMM	Q8TF30	809 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SGSM3	Q96HU1	749 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	INPP4A	Q96PE3	977 aa	Predicted RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TINF2	Q9BSI4	451 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MAD2L2	Q9UI95	211 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PCDHA12	Q9UN75	941 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	L3MBTL1	Q9Y468	752 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	LRRC37A	A6NMS7	1700 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	GRID2IP	A4D2P6	1211 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	WDR64	B1ANS9	1081 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CLGN	O14967	610 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SART1	O43290	800 aa	Known RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MYC	P01106	439 aa	Predicted RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	EZR	P15311	586 aa	Known RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	HOXA13	P31271	388 aa	Predicted RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	LBX1	P52954	281 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TFDP1	Q14186	410 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	FAM133B	Q5BKY9	247 aa	Known RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NAIF1	Q69YI7	327 aa	Predicted RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CD302	Q8IX05	232 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	USP38	Q8NB14	1042 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CCSER1	Q9C0I3	900 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SLC12A6	Q9UHW9	1150 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	KIF13B	Q9NQT8	1826 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CCDC189	A1A4V9	331 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783		H0YGN5	161 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PJA2	O43164	708 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DYNC1LI2	O43237	492 aa	Predicted RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	KIF1C	O43896	1103 aa	Known RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	LCA5L	O95447	670 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ECHS1	P30084	290 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PPP2R2A	P63151	447 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TNNC1	P63316	161 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	IFFO1	Q0D2I5	559 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	RPS6KA1	Q15418	735 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CEP55	Q53EZ4	464 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	WLS	Q5T9L3	541 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MEI1	Q5TIA1	1274 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CENPP	Q6IPU0	288 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CNNM4	Q6P4Q7	775 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ZNF467	Q7Z7K2	595 aa	Predicted RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TBC1D1	Q86TI0	1168 aa	Predicted RBP	6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ARFGAP2	Q8N6H7	521 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TBCK	Q8TEA7	893 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	STAMBPL1	Q96FJ0	436 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DNM3	Q9UQ16	869 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NFS1	Q9Y697	457 aa		6.12	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ATXN2	Q99700	1313 aa	Known RBP	6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TBX3	O15119	743 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CYTH3	O43739	400 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SNHG28	P0DPA3	235 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ACTN1	P12814	892 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	XRCC5	P13010	732 aa	Known RBP	6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DHX9	Q08211	1270 aa	Known RBP	6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	KLHL30	Q0D2K2	578 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MYO1E	Q12965	1108 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NAB2	Q15742	525 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DGKD	Q16760	1214 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	GNAS	Q5JWF2	1037 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	GKAP1	Q5VSY0	366 aa	Predicted RBP	6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	USP37	Q86T82	979 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MREG	Q8N565	214 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	C7orf31	Q8N865	590 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SEPT1	Q8WYJ6	367 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	RUBCN	Q92622	972 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	C7orf25	Q9BPX7	421 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SELENOS	Q9BQE4	189 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MMTAG2	Q9BU76	263 aa	Known RBP	6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	INO80B	Q9C086	356 aa	Predicted RBP	6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SMARCAD1	Q9H4L7	1026 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PLCB1	Q9NQ66	1216 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ATP8A1	Q9Y2Q0	1164 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	WDR90	Q96KV7	1748 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	RRN3P2	A6NIE6	340 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CCDC85C	A6NKD9	419 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TTI1	O43156	1089 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SLC26A4	O43511	780 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CHMP2A	O43633	222 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NOL4	O94818	638 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	IRF5	Q13568	498 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TMEM132B	Q14DG7	1078 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MOXD1	Q6UVY6	613 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SV2B	Q7L1I2	683 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NIPA1	Q7RTP0	329 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ZBTB8OS	Q8IWT0	167 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	RNF10	Q8N5U6	811 aa	Known RBP	6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SLC17A8	Q8NDX2	589 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PXYLP1	Q8TE99	480 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	AK8	Q96MA6	479 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SPATA33	Q96N06	139 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ISCU	Q9H1K1	167 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ACTR5	Q9H9F9	607 aa	Predicted RBP	6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TMEM260	Q9NX78	707 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	POTEM	A6NI47	508 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DDX39A	O00148	427 aa	Known RBP	6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	KRIT1	O00522	736 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	FAM13A	O94988	1023 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	UPP2	O95045	317 aa		6.11	□□□□□ -1.43

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