RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 ZFHX2Q9C0A1 2572 aaPredicted RBP15.73■□□□□ 0.11
SNHG1-213ENST00000540725 BTBD18B2RXH4 712 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 WNT7AO00755 349 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 NEMFO60524 1076 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 JAK2O60674 1132 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 DGAT1O75907 488 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 PTPN5P54829 565 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 VCPP55072 806 aaKnown RBP15.72■□□□□ 0.11
SNHG1-213ENST00000540725 MTMR3Q13615 1198 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 CAPSQ13938 189 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 NOTUMQ6P988 496 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 TMC5Q6UXY8 1006 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 IFNLR1Q8IU57 520 aaPredicted RBP15.72■□□□□ 0.11
SNHG1-213ENST00000540725 TDRD5Q8NAT2 981 aaKnown RBP15.72■□□□□ 0.11
SNHG1-213ENST00000540725 ASAP3Q8TDY4 903 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 CPB2Q96IY4 423 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 KLHL5Q96PQ7 755 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 EMILIN2Q9BXX0 1053 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 CSRNP2Q9H175 543 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 RNF39Q9H2S5 420 aa15.72■□□□□ 0.11
SNHG1-213ENST00000540725 DBR1Q9UK59 544 aaKnown RBP15.72■□□□□ 0.11
SNHG1-213ENST00000540725 PRG3Q9Y2Y8 225 aaPredicted RBP15.72■□□□□ 0.11
SNHG1-213ENST00000540725 DOCK8Q8NF50 2099 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 SPDYE4A6NLX3 237 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 INPPL1O15357 1258 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 LILRB3O75022 631 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 BRD1O95696 1058 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 CNPP09543 421 aaKnown RBP15.71■□□□□ 0.11
SNHG1-213ENST00000540725 KLRC2P26717 231 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 ARL2P36404 184 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 MLH1P40692 756 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 TXKP42681 527 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 CLCN4P51793 760 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 MBTD1Q05BQ5 628 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 POU5F1BQ06416 359 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 NCBP1Q09161 790 aaKnown RBP15.71■□□□□ 0.11
SNHG1-213ENST00000540725 TRIM29Q14134 588 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 AMHR2Q16671 573 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 UBALD2Q8IYN6 164 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 ZDHHC14Q8IZN3 488 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 FEZF2Q8TBJ5 459 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 GAD1Q99259 594 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 HERC2P3Q9BVR0 1158 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 SFXN1Q9H9B4 322 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 MRPL17Q9NRX2 175 aaKnown RBP15.71■□□□□ 0.11
SNHG1-213ENST00000540725 MARCH5Q9NX47 278 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 HES2Q9Y543 173 aa15.71■□□□□ 0.11
SNHG1-213ENST00000540725 RIF1Q5UIP0 2472 aaKnown RBP15.71■□□□□ 0.1
SNHG1-213ENST00000540725 ARL5CA6NH57 179 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 PDGFBP01127 241 aaPredicted RBP15.7■□□□□ 0.1
SNHG1-213ENST00000540725 SOD2P04179 222 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 URODP06132 367 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 ARF4P18085 180 aaPredicted RBP15.7■□□□□ 0.1
SNHG1-213ENST00000540725 GLRA2P23416 452 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 AVPR2P30518 371 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 OR1G1P47890 313 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 RARRES1P49788 294 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 SCNN1GP51170 649 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 NEK4P51957 841 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 TCF15Q12870 199 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 COLGALT2Q8IYK4 626 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 PIGOQ8TEQ8 1089 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 ZFP42Q96MM3 310 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 MTMR9Q96QG7 549 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 PHOX2BQ99453 314 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 APOL6Q9BWW8 343 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 PPP4R2Q9NY27 417 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 USTQ9Y2C2 406 aa15.7■□□□□ 0.1
SNHG1-213ENST00000540725 A0A087WWV3 80 aa15.69■□□□□ 0.1
SNHG1-213ENST00000540725 POTEMA6NI47 508 aa15.69■□□□□ 0.1
SNHG1-213ENST00000540725 C2CD2LO14523 706 aa15.69■□□□□ 0.1
SNHG1-213ENST00000540725 USO1O60763 962 aaKnown RBP15.69■□□□□ 0.1
SNHG1-213ENST00000540725 ASGR2P07307 311 aa15.69■□□□□ 0.1
SNHG1-213ENST00000540725 DSC1Q08554 894 aa15.69■□□□□ 0.1
SNHG1-213ENST00000540725 GPR149Q86SP6 731 aa15.69■□□□□ 0.1
SNHG1-213ENST00000540725 PLCD3Q8N3E9 789 aa15.69■□□□□ 0.1
SNHG1-213ENST00000540725 NFKBIZQ9BYH8 718 aa15.69■□□□□ 0.1
SNHG1-213ENST00000540725 TRIM6Q9C030 488 aaPredicted RBP15.69■□□□□ 0.1
SNHG1-213ENST00000540725 POLR3FQ9H1D9 316 aaPredicted RBP15.69■□□□□ 0.1
SNHG1-213ENST00000540725 SMOC2Q9H3U7 446 aa15.69■□□□□ 0.1
SNHG1-213ENST00000540725 NXF3Q9H4D5 531 aaKnown RBP15.69■□□□□ 0.1
SNHG1-213ENST00000540725 MIOSQ9NXC5 875 aa15.69■□□□□ 0.1
SNHG1-213ENST00000540725 LIMD1Q9UGP4 676 aa15.69■□□□□ 0.1
SNHG1-213ENST00000540725 PTPRZ1P23471 2315 aaPredicted RBP15.69■□□□□ 0.1
SNHG1-213ENST00000540725 TRIP11Q15643 1979 aa15.68■□□□□ 0.1
SNHG1-213ENST00000540725 DOCK6Q96HP0 2047 aa15.68■□□□□ 0.1
SNHG1-213ENST00000540725 B4GALT5O43286 388 aa15.68■□□□□ 0.1
SNHG1-213ENST00000540725 GLUD2P49448 558 aa15.68■□□□□ 0.1
SNHG1-213ENST00000540725 ST3GAL1Q11201 340 aa15.68■□□□□ 0.1
SNHG1-213ENST00000540725 CCDC149Q6ZUS6 474 aa15.68■□□□□ 0.1
SNHG1-213ENST00000540725 TAS1R1Q7RTX1 841 aa15.68■□□□□ 0.1
SNHG1-213ENST00000540725 HACE1Q8IYU2 909 aa15.68■□□□□ 0.1
SNHG1-213ENST00000540725 RNF168Q8IYW5 571 aaPredicted RBP15.68■□□□□ 0.1
SNHG1-213ENST00000540725 RPS6KC1Q96S38 1066 aa15.68■□□□□ 0.1
SNHG1-213ENST00000540725 TMEM60Q9H2L4 133 aa15.68■□□□□ 0.1
SNHG1-213ENST00000540725 SSX2IPQ9Y2D8 614 aa15.68■□□□□ 0.1
SNHG1-213ENST00000540725 GIT1Q9Y2X7 761 aa15.68■□□□□ 0.1
SNHG1-213ENST00000540725 USP34Q70CQ2 3546 aa15.68■□□□□ 0.1
SNHG1-213ENST00000540725 F8W810 466 aa15.67■□□□□ 0.1
SNHG1-213ENST00000540725 TEX28O15482 410 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms