RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 ERICH1Q86X53 443 aa10.1□□□□□ -0.79
LDHA-218ENST00000540430 NCAPG2Q86XI2 1143 aa10.1□□□□□ -0.79
LDHA-218ENST00000540430 RASGEF1CQ8N431 466 aa10.1□□□□□ -0.79
LDHA-218ENST00000540430 KLHL29Q96CT2 875 aa10.1□□□□□ -0.79
LDHA-218ENST00000540430 STMN4Q9H169 189 aaPredicted RBP10.1□□□□□ -0.79
LDHA-218ENST00000540430 ADAM7Q9H2U9 754 aa10.1□□□□□ -0.79
LDHA-218ENST00000540430 ECT2Q9H8V3 914 aa10.1□□□□□ -0.79
LDHA-218ENST00000540430 PAK6Q9NQU5 681 aaPredicted RBP10.1□□□□□ -0.79
LDHA-218ENST00000540430 INTS9Q9NV88 658 aaKnown RBP10.1□□□□□ -0.79
LDHA-218ENST00000540430 RGL1Q9NZL6 768 aa10.1□□□□□ -0.79
LDHA-218ENST00000540430 MORF4L1Q9UBU8 362 aa10.1□□□□□ -0.79
LDHA-218ENST00000540430 PNMA2Q9UL42 364 aa10.1□□□□□ -0.79
LDHA-218ENST00000540430 UTP11Q9Y3A2 253 aaKnown RBP10.1□□□□□ -0.79
LDHA-218ENST00000540430 CNTNAP5Q8WYK1 1306 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 PLEKHA8P1O95397 391 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 SCG2P13521 617 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 FLT3P36888 993 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 NLRP5P59047 1200 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 DYNLL1P63167 89 aaKnown RBP10.09□□□□□ -0.79
LDHA-218ENST00000540430 JAG1P78504 1218 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 LAMB3Q13751 1172 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 TAF11Q15544 211 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 PPP2R5EQ16537 467 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 APBB1IPQ7Z5R6 666 aaPredicted RBP10.09□□□□□ -0.79
LDHA-218ENST00000540430 DDX42Q86XP3 938 aaKnown RBP eCLIP10.09□□□□□ -0.79
LDHA-218ENST00000540430 RBM12BQ8IXT5 1001 aaKnown RBP10.09□□□□□ -0.79
LDHA-218ENST00000540430 ZSCAN10Q96SZ4 725 aaPredicted RBP10.09□□□□□ -0.79
LDHA-218ENST00000540430 FMO2Q99518 471 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 ELAC2Q9BQ52 826 aaKnown RBP10.09□□□□□ -0.79
LDHA-218ENST00000540430 TMEM109Q9BVC6 243 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 ABCF3Q9NUQ8 709 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 ADAM22Q9P0K1 906 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 SAP30BPQ9UHR5 308 aaKnown RBP10.09□□□□□ -0.79
LDHA-218ENST00000540430 ZBTB21Q9ULJ3 1066 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 USP15Q9Y4E8 981 aaPredicted RBP10.09□□□□□ -0.79
LDHA-218ENST00000540430 ASB3Q9Y575 518 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 SLC4A4Q9Y6R1 1079 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 MYH1P12882 1939 aa10.09□□□□□ -0.79
LDHA-218ENST00000540430 SPDYE3A6NKU9 549 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 DAPK3O43293 454 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 SUN1O94901 812 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 GDF11O95390 407 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 SETSIPP0DME0 302 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 PCP11498 1178 aaKnown RBP10.08□□□□□ -0.8
LDHA-218ENST00000540430 CCDC178Q5BJE1 867 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 C6orf118Q5T5N4 469 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 IFIT1BQ5T764 474 aaKnown RBP10.08□□□□□ -0.8
LDHA-218ENST00000540430 BTNL9Q6UXG8 535 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 SPATA21Q7Z572 469 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 LMNTD2Q8IXW0 634 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 MAGEB6Q8N7X4 407 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 ENAHQ8N8S7 591 aaPredicted RBP10.08□□□□□ -0.8
LDHA-218ENST00000540430 DEFB118Q96PH6 123 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 MMTAG2Q9BU76 263 aaKnown RBP10.08□□□□□ -0.8
LDHA-218ENST00000540430 PABPC3Q9H361 631 aaKnown RBP10.08□□□□□ -0.8
LDHA-218ENST00000540430 SEMA6BQ9H3T3 888 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 ARMT1Q9H993 441 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 TTC7AQ9ULT0 858 aaPredicted RBP10.08□□□□□ -0.8
LDHA-218ENST00000540430 PCDHGA4Q9Y5G9 962 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 CEP104O60308 925 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 EVI5O60447 810 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 SMIM24O75264 130 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 HMGCRP04035 888 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 KRT16P08779 473 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 CCNB1P14635 433 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 GBP1P32455 592 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 PFKFB3Q16875 520 aaPredicted RBP10.08□□□□□ -0.8
LDHA-218ENST00000540430 ARMC3Q5W041 872 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 MIGA1Q8NAN2 632 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 CFAP61Q8NHU2 1237 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 EEF2KMTQ96G04 330 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 RAB3IPQ96QF0 476 aaPredicted RBP10.08□□□□□ -0.8
LDHA-218ENST00000540430 P2RX7Q99572 595 aaKnown RBP10.08□□□□□ -0.8
LDHA-218ENST00000540430 CRISPLD2Q9H0B8 497 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 SH3GLB2Q9NR46 395 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 GJD2Q9UKL4 321 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 PACSIN2Q9UNF0 486 aaPredicted RBP10.08□□□□□ -0.8
LDHA-218ENST00000540430 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.08□□□□□ -0.8
LDHA-218ENST00000540430 NOC2LQ9Y3T9 749 aaKnown RBP10.08□□□□□ -0.8
LDHA-218ENST00000540430 NR2E3Q9Y5X4 410 aa10.08□□□□□ -0.8
LDHA-218ENST00000540430 KRIT1O00522 736 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 NKRFO15226 690 aaKnown RBP eCLIP10.07□□□□□ -0.83e-6■□□□□ 8.8
LDHA-218ENST00000540430 HIP1RO75146 1068 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 GJB6O95452 261 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 GNAT1P11488 350 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 DNA2P51530 1060 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 RNASE9P60153 205 aaKnown RBP10.07□□□□□ -0.8
LDHA-218ENST00000540430 ASIC1P78348 528 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 SHROOM1Q2M3G4 852 aaPredicted RBP10.07□□□□□ -0.8
LDHA-218ENST00000540430 TNFAIP8L3Q5GJ75 292 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 FAM83BQ5T0W9 1011 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 TATDN1Q6P1N9 297 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 SPICE1Q8N0Z3 855 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 GUF1Q8N442 669 aaKnown RBP10.07□□□□□ -0.8
LDHA-218ENST00000540430 LRRC57Q8N9N7 239 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 KIAA0895Q8NCT3 520 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 NEK9Q8TD19 979 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 GTF3C2Q8WUA4 911 aaPredicted RBP10.07□□□□□ -0.8
LDHA-218ENST00000540430 EPAS1Q99814 870 aa10.07□□□□□ -0.8
LDHA-218ENST00000540430 RXFP1Q9HBX9 757 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms