RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 MCM6Q14566 821 aa14.75□□□□□ -0.05
CCDC130-202ENST00000540216 ARSHQ5FYA8 562 aa14.75□□□□□ -0.05
CCDC130-202ENST00000540216 KCNT2Q6UVM3 1135 aa14.75□□□□□ -0.05
CCDC130-202ENST00000540216 THNSL1Q8IYQ7 743 aa14.75□□□□□ -0.05
CCDC130-202ENST00000540216 PPM1EQ8WY54 764 aa14.75□□□□□ -0.05
CCDC130-202ENST00000540216 KCNN1Q92952 543 aa14.75□□□□□ -0.05
CCDC130-202ENST00000540216 PDZD7Q9H5P4 517 aa14.75□□□□□ -0.05
CCDC130-202ENST00000540216 TBC1D13Q9NVG8 400 aa14.75□□□□□ -0.05
CCDC130-202ENST00000540216 LZTS1Q9Y250 596 aa14.75□□□□□ -0.05
CCDC130-202ENST00000540216 INPP5FQ9Y2H2 1132 aa14.75□□□□□ -0.05
CCDC130-202ENST00000540216 ATP6V1DQ9Y5K8 247 aa14.75□□□□□ -0.05
CCDC130-202ENST00000540216 TBCAO75347 108 aaKnown RBP14.74□□□□□ -0.05
CCDC130-202ENST00000540216 FGF18O76093 207 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 NPTXRO95502 500 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 KRT18P05783 430 aaKnown RBP14.74□□□□□ -0.05
CCDC130-202ENST00000540216 LIG1P18858 919 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 ABCD1P33897 745 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 ALDH7A1P49419 539 aaKnown RBP14.74□□□□□ -0.05
CCDC130-202ENST00000540216 ZNF131P52739 623 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 RNASELQ05823 741 aaKnown RBP14.74□□□□□ -0.05
CCDC130-202ENST00000540216 RAD51AP2Q09MP3 1159 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 DHX8Q14562 1220 aaKnown RBP14.74□□□□□ -0.05
CCDC130-202ENST00000540216 DCAF4L1Q3SXM0 396 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 LONRF3Q496Y0 759 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 ATF7IP2Q5U623 682 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.74□□□□□ -0.05
CCDC130-202ENST00000540216 SLC17A8Q8NDX2 589 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 SPPL3Q8TCT6 385 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 LRRC15Q8TF66 581 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 REEP2Q9BRK0 252 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 MRPL4Q9BYD3 311 aaKnown RBP14.74□□□□□ -0.05
CCDC130-202ENST00000540216 NXF3Q9H4D5 531 aaKnown RBP14.74□□□□□ -0.05
CCDC130-202ENST00000540216 NSUN3Q9H649 340 aaKnown RBP14.74□□□□□ -0.05
CCDC130-202ENST00000540216 PARVGQ9HBI0 331 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 ALG13Q9NP73 1137 aaKnown RBP14.74□□□□□ -0.05
CCDC130-202ENST00000540216 SPG21Q9NZD8 308 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 HCSTQ9UBK5 93 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 GIT1Q9Y2X7 761 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 MYH11P35749 1972 aa14.74□□□□□ -0.05
CCDC130-202ENST00000540216 SFI1A8K8P3 1242 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 SLC16A4O15374 487 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 FAM13AO94988 1023 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 STAT6P42226 847 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 PLCB3Q01970 1234 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 KRT17Q04695 432 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 DNM1Q05193 864 aaKnown RBP14.73□□□□□ -0.05
CCDC130-202ENST00000540216 STRN3Q13033 797 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 GIT2Q14161 759 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 SKIV2LQ15477 1246 aaKnown RBP14.73□□□□□ -0.05
CCDC130-202ENST00000540216 PDE12Q6L8Q7 609 aaKnown RBP14.73□□□□□ -0.05
CCDC130-202ENST00000540216 SV2BQ7L1I2 683 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 CDR2LQ86X02 465 aaPredicted RBP14.73□□□□□ -0.05
CCDC130-202ENST00000540216 TMEM161BQ8NDZ6 487 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 PPP2R3CQ969Q6 453 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 THEGQ9P2T0 379 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 COG5Q9UP83 839 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 TNFSF13BQ9Y275 285 aa14.73□□□□□ -0.05
CCDC130-202ENST00000540216 NPHP3-ACAD11A0A0J9YXS1 232 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 ARL5CA6NH57 179 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 TTLL13PA6NNM8 815 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 NCK2O43639 380 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 ZC3H11AO75152 810 aaKnown RBP eCLIP14.72□□□□□ -0.05
CCDC130-202ENST00000540216 MAPTP10636 758 aaKnown RBP14.72□□□□□ -0.05
CCDC130-202ENST00000540216 MLH1P40692 756 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 ME1P48163 572 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 NCKAP1LP55160 1127 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 BCAR1P56945 870 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 KRT85P78386 507 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 FOXD4L6Q3SYB3 417 aaPredicted RBP14.72□□□□□ -0.05
CCDC130-202ENST00000540216 NT5DC1Q5TFE4 455 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 FOXD4L3Q6VB84 417 aaPredicted RBP14.72□□□□□ -0.05
CCDC130-202ENST00000540216 SLC39A11Q8N1S5 342 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 POF1BQ8WVV4 589 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 MRPS27Q92552 414 aaKnown RBP14.72□□□□□ -0.05
CCDC130-202ENST00000540216 FAM193BQ96PV7 902 aaPredicted RBP14.72□□□□□ -0.05
CCDC130-202ENST00000540216 GAD1Q99259 594 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 TMEM175Q9BSA9 504 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 RNF39Q9H2S5 420 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 CUEDC2Q9H467 287 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 NRDE2Q9H7Z3 1164 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 STK39Q9UEW8 545 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 PUF60Q9UHX1 559 aaKnown RBP14.72□□□□□ -0.05
CCDC130-202ENST00000540216 RCOR1Q9UKL0 485 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 ZDHHC9Q9Y397 364 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 HES2Q9Y543 173 aa14.72□□□□□ -0.05
CCDC130-202ENST00000540216 EDN1P05305 212 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 CACNB1Q02641 598 aaPredicted RBP14.71□□□□□ -0.05
CCDC130-202ENST00000540216 CAMK1Q14012 370 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 AAK1Q2M2I8 961 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 AXDND1Q5T1B0 1012 aaPredicted RBP14.71□□□□□ -0.05
CCDC130-202ENST00000540216 EEF1DP3Q658K8 133 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 ZPBP2Q6X784 338 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 TAS1R3Q7RTX0 852 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 MYCT1Q8N699 235 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 ATXN2LQ8WWM7 1075 aaKnown RBP14.71□□□□□ -0.05
CCDC130-202ENST00000540216 HLA-CQ95604 372 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 TMEM169Q96HH4 297 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 RPS6KC1Q96S38 1066 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 ACO2Q99798 780 aaKnown RBP14.71□□□□□ -0.05
CCDC130-202ENST00000540216 APOL6Q9BWW8 343 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms