RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 DPYSQ14117 519 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 C15orf59Q2T9L4 293 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-211ENST00000539921 MYLK3Q32MK0 819 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 TRMT5Q32P41 509 aaKnown RBP6.55□□□□□ -1.36
SNHG1-211ENST00000539921 WDR45BQ5MNZ6 344 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 BEND3Q5T5X7 828 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 SLX4IPQ5VYV7 408 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 TSHZ3Q63HK5 1081 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 LRRC8BQ6P9F7 803 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 WDR59Q6PJI9 974 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 POTEHQ6S545 545 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 PPP1R21Q6ZMI0 780 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 ANKRD13DQ6ZTN6 518 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 SLC51BQ86UW2 128 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 MCF2L2Q86YR7 1114 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 THEMISQ8N1K5 641 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-211ENST00000539921 USP38Q8NB14 1042 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 GOLM1Q8NBJ4 401 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 TOR1AIP2Q8NFQ8 470 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 SUN5Q8TC36 379 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 ZNF507Q8TCN5 953 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 SCFD2Q8WU76 684 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 MAGEB18Q96M61 343 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 PPP1R10Q96QC0 940 aaKnown RBP6.55□□□□□ -1.36
SNHG1-211ENST00000539921 MED15Q96RN5 788 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 MAP3K14Q99558 947 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 ECSITQ9BQ95 431 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 PSD2Q9BQI7 771 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 HAUS8Q9BT25 410 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 TBC1D10AQ9BXI6 508 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 STK33Q9BYT3 514 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 FAM117AQ9C073 453 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 SLC7A5P2Q9GIP4 190 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 NDEL1Q9GZM8 345 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 Q9H521 79 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 DENND2DQ9H6A0 471 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-211ENST00000539921 CAAP1Q9H8G2 361 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 CD209Q9NNX6 404 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 TYW1Q9NV66 732 aaKnown RBP6.55□□□□□ -1.36
SNHG1-211ENST00000539921 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.55□□□□□ -1.363e-11■□□□□ 8.9
SNHG1-211ENST00000539921 RABGEF1Q9UJ41 708 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 GNPTGQ9UJJ9 305 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 FBXL5Q9UKA1 691 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 DNAJC12Q9UKB3 198 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 FAF1Q9UNN5 650 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-211ENST00000539921 PLAGL2Q9UPG8 496 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 ZNF652Q9Y2D9 606 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 HEY1Q9Y5J3 304 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 MYO5AQ9Y4I1 1855 aaKnown RBP6.55□□□□□ -1.36
SNHG1-211ENST00000539921 PITPNM2Q9BZ72 1349 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 STK36Q9NRP7 1315 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 TTC26A0AVF1 554 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 DDX3XO00571 662 aaKnown RBP eCLIP6.54□□□□□ -1.36
SNHG1-211ENST00000539921 VILLO15195 856 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 ZNF185O15231 689 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 RGS16O15492 202 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-211ENST00000539921 ZC3H11AO75152 810 aaKnown RBP eCLIP6.54□□□□□ -1.361e-6■■□□□ 11.7
SNHG1-211ENST00000539921 TCEA3O75764 348 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 HSPA1AP0DMV8 641 aaKnown RBP6.54□□□□□ -1.36
SNHG1-211ENST00000539921 HSPA1BP0DMV9 641 aaKnown RBP6.54□□□□□ -1.36
SNHG1-211ENST00000539921 SRGNP10124 158 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 HOXB1P14653 301 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-211ENST00000539921 LMNB1P20700 586 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 LONP1P36776 959 aaKnown RBP6.54□□□□□ -1.36
SNHG1-211ENST00000539921 PHKA2P46019 1235 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 IFNAR2P48551 515 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 GSSP48637 474 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 PCYT1AP49585 367 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 GALK1P51570 392 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 CHN2P52757 468 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 NR1H2P55055 460 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 ERVK-9P63128 1117 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 NOP14P78316 857 aaKnown RBP6.54□□□□□ -1.36
SNHG1-211ENST00000539921 DLG4P78352 724 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 GALNT1Q10472 559 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-211ENST00000539921 WASHC5Q12768 1159 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 TRAP1Q12931 704 aaKnown RBP6.54□□□□□ -1.36
SNHG1-211ENST00000539921 STK4Q13043 487 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 NMIQ13287 307 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-211ENST00000539921 MED21Q13503 144 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 HIC1Q14526 733 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 RASA2Q15283 850 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 EPHA7Q15375 998 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 ZNF829Q3KNS6 432 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-211ENST00000539921 COBLL1Q53SF7 1204 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 SGO2Q562F6 1265 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 TCP11X2Q5H9J9 407 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 TMCO4Q5TGY1 634 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 METTL21CQ5VZV1 264 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 PPP4R4Q6NUP7 873 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 FOXR2Q6PJQ5 311 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 LINC00299Q6ZSB3 139 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 ANO5Q75V66 913 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 VSIG1Q86XK7 387 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 MMAAQ8IVH4 418 aaKnown RBP6.54□□□□□ -1.36
SNHG1-211ENST00000539921 AHI1Q8N157 1196 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 KIF2BQ8N4N8 673 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 KCTD17Q8N5Z5 321 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 MB21D1Q8N884 522 aa6.54□□□□□ -1.36
SNHG1-211ENST00000539921 PCYOX1LQ8NBM8 494 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms