RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 C8orf76Q96K31 380 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 RPS6KC1Q96S38 1066 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 NFKBIZQ9BYH8 718 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 IRF2BPLQ9H1B7 796 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 POLR3FQ9H1D9 316 aaPredicted RBP16.98■□□□□ 0.31
UBE3B-211ENST00000539843 POMKQ9H5K3 350 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 TUFT1Q9NNX1 390 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 LIMCH1Q9UPQ0 1083 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 SORCS3Q9UPU3 1222 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 GIT1Q9Y2X7 761 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 PRG3Q9Y2Y8 225 aaPredicted RBP16.98■□□□□ 0.31
UBE3B-211ENST00000539843 MUC6Q6W4X9 2439 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 LRRIQ4A6NIV6 560 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 NRP1O14786 923 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 ZBTB39O15060 712 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 JAK2O60674 1132 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 DTNBO60941 627 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 LARGE1O95461 756 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 SOD2P04179 222 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 ADH1AP07327 375 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 MLH1P40692 756 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 RARRES1P49788 294 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 HMGN5P82970 282 aaKnown RBP16.97■□□□□ 0.31
UBE3B-211ENST00000539843 NHLH1Q02575 133 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 CAPSQ13938 189 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 UBXN11Q5T124 520 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 HAUS3Q68CZ6 603 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 CCDC149Q6ZUS6 474 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 CPB2Q96IY4 423 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 PRIMPOLQ96LW4 560 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 NACC1Q96RE7 527 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 LLPHQ9BRT6 129 aaKnown RBP16.97■□□□□ 0.31
UBE3B-211ENST00000539843 COLEC11Q9BWP8 271 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 APOL6Q9BWW8 343 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 C2orf40Q9H1Z8 148 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 XPNPEP1Q9NQW7 623 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 DAXXQ9UER7 740 aaPredicted RBP16.97■□□□□ 0.31
UBE3B-211ENST00000539843 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
UBE3B-211ENST00000539843 USTQ9Y2C2 406 aa16.97■□□□□ 0.31
UBE3B-211ENST00000539843 ARL5CA6NH57 179 aa16.96■□□□□ 0.31
UBE3B-211ENST00000539843 POTEMA6NI47 508 aa16.96■□□□□ 0.31
UBE3B-211ENST00000539843 DDHD2O94830 711 aa16.96■□□□□ 0.31
UBE3B-211ENST00000539843 EPCAMP16422 314 aa16.96■□□□□ 0.31
UBE3B-211ENST00000539843 ARL2P36404 184 aa16.96■□□□□ 0.31
UBE3B-211ENST00000539843 CREMQ03060 361 aa16.96■□□□□ 0.31
UBE3B-211ENST00000539843 MBTD1Q05BQ5 628 aa16.96■□□□□ 0.31
UBE3B-211ENST00000539843 SLC27A1Q6PCB7 646 aa16.96■□□□□ 0.31
UBE3B-211ENST00000539843 ALYREFQ86V81 257 aaKnown RBP16.96■□□□□ 0.31
UBE3B-211ENST00000539843 KREMEN2Q8NCW0 462 aa16.96■□□□□ 0.31
UBE3B-211ENST00000539843 SMG8Q8ND04 991 aaKnown RBP16.96■□□□□ 0.31
UBE3B-211ENST00000539843 PIGOQ8TEQ8 1089 aa16.96■□□□□ 0.31
UBE3B-211ENST00000539843 KLHL5Q96PQ7 755 aa16.96■□□□□ 0.31
UBE3B-211ENST00000539843 GAD1Q99259 594 aa16.96■□□□□ 0.31
UBE3B-211ENST00000539843 HERC2P3Q9BVR0 1158 aa16.96■□□□□ 0.31
UBE3B-211ENST00000539843 EIF2AQ9BY44 585 aaKnown RBP16.96■□□□□ 0.31
UBE3B-211ENST00000539843 PRMT7Q9NVM4 692 aaPredicted RBP16.96■□□□□ 0.31
UBE3B-211ENST00000539843 ZMYM2Q9UBW7 1377 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 C2CD4DB7Z1M9 353 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 C2CD2LO14523 706 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 GLRA2P23416 452 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 GLUD2P49448 558 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 SCNN1GP51170 649 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 PPP2R5AQ15172 486 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 TMC5Q6UXY8 1006 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 OTOP3Q7RTS5 596 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 APBB1IPQ7Z5R6 666 aaPredicted RBP16.95■□□□□ 0.3
UBE3B-211ENST00000539843 COLGALT2Q8IYK4 626 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 C12orf76Q8N812 135 aaPredicted RBP16.95■□□□□ 0.3
UBE3B-211ENST00000539843 ASAP3Q8TDY4 903 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 SLC22A17Q8WUG5 538 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 BCL7CQ8WUZ0 217 aaPredicted RBP16.95■□□□□ 0.3
UBE3B-211ENST00000539843 ZSCAN31Q96LW9 406 aaPredicted RBP16.95■□□□□ 0.3
UBE3B-211ENST00000539843 MTMR9Q96QG7 549 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 ADPGKQ9BRR6 497 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 RAB34Q9BZG1 259 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 FOXP1Q9H334 677 aaPredicted RBP16.95■□□□□ 0.3
UBE3B-211ENST00000539843 PARP2Q9UGN5 583 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 STK24Q9Y6E0 443 aa16.95■□□□□ 0.3
UBE3B-211ENST00000539843 ARHGEF35A5YM69 484 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 INPPL1O15357 1258 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 NPTXRO95502 500 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 GLUD1P00367 558 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 OR52Z1P0C646 297 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 ARF4P18085 180 aaPredicted RBP16.94■□□□□ 0.3
UBE3B-211ENST00000539843 RBM25P49756 843 aaKnown RBP16.94■□□□□ 0.3
UBE3B-211ENST00000539843 CLCN4P51793 760 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 NUBP1P53384 320 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 GUCY1B3Q02153 619 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 GRIK3Q13003 919 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 C15orf39Q6ZRI6 1047 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 MAEAQ7L5Y9 396 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 CCDC83Q8IWF9 413 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 ZDHHC14Q8IZN3 488 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 STAMQ92783 540 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 POLR3CQ9BUI4 534 aaPredicted RBP16.94■□□□□ 0.3
UBE3B-211ENST00000539843 SH2B1Q9NRF2 756 aaPredicted RBP16.94■□□□□ 0.3
UBE3B-211ENST00000539843 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.94■□□□□ 0.3
UBE3B-211ENST00000539843 KIF3AQ9Y496 699 aa16.94■□□□□ 0.3
UBE3B-211ENST00000539843 N4BP3O15049 544 aa16.93■□□□□ 0.3
UBE3B-211ENST00000539843 CNPP09543 421 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms