RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 RRAGAQ7L523 313 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 TMEM174Q8WUU8 243 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 TRAPPC12Q8WVT3 735 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 HAUS4Q9H6D7 363 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 USP20Q9Y2K6 914 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 KIF3CO14782 793 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 IVLP07476 585 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 POLR2FP61218 127 aaKnown RBP18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 CACNA2D4Q7Z3S7 1137 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 XXYLT1Q8NBI6 393 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 AFG1LQ8WV93 481 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 ABHD16BQ9H3Z7 469 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 RNPEPQ9H4A4 650 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 MED4Q9NPJ6 270 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 GOLGA8IPA6NC78 632 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 LRRIQ4A6NIV6 560 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 LRRC53A6NM62 1247 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 GOLGA8JA6NMD2 632 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 RPS6KA5O75582 802 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 SMPD1P17405 629 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 BFSP1Q12934 665 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 EXOC3L4Q17RC7 722 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 PRAMEF19Q5SWL8 479 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 DPY19L2P1Q6NXN4 242 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 PLAGL2Q9UPG8 496 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 TRPC6Q9Y210 931 aa18.55■□□□□ 0.56
PCDHB17P-201ENST00000539533 ENC1O14682 589 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 PON1P27169 355 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 SNRPFP62306 86 aaKnown RBP18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 DLG4P78352 724 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 MAP2K5Q13163 448 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 CRHR2Q13324 411 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 MKRN4PQ13434 485 aaPredicted RBP18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 ZBTB10Q96DT7 871 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 ZNHIT6Q9NWK9 470 aaKnown RBP18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 FLRT1Q9NZU1 646 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 CEP72Q9P209 647 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 HDAC6Q9UBN7 1215 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 HNRNPDLO14979 420 aaKnown RBP18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 ADCY6O43306 1168 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 PHACTR2O75167 634 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 LGALS2P05162 132 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 NAMPTP43490 491 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 LRRC71Q8N4P6 559 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 PRPF31Q8WWY3 499 aaKnown RBP18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 SAAL1Q96ER3 474 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 EDEM3Q9BZQ6 932 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 SLC5A4Q9NY91 659 aa18.54■□□□□ 0.56
PCDHB17P-201ENST00000539533 ATP1A1P05023 1023 aaKnown RBP18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 PLEKP08567 350 aaPredicted RBP18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 FMO5P49326 533 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 SLC26A2P50443 739 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 PPP2R5AQ15172 486 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 DUSP28Q4G0W2 176 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 CBWD6Q4V339 395 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 CBWD3Q5JTY5 395 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 CBWD5Q5RIA9 395 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 PPTC7Q8NI37 304 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 DEPTORQ8TB45 409 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 GANQ9H2C0 597 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 VIPAS39Q9H9C1 493 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 ZFYVE28Q9HCC9 887 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 ERAP1Q9NZ08 941 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 CENPFP49454 3210 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 HNRNPH3P31942 346 aaKnown RBP18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 CAPSQ13938 189 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 CCDC122Q5T0U0 273 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 PDXDC1Q6P996 788 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 GBP6Q6ZN66 633 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 CBWD2Q8IUF1 395 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 GOLGA6L1Q8N7Z2 621 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 PLEKHO2Q8TD55 490 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 EMID1Q96A84 441 aaPredicted RBP18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 BICD1Q96G01 975 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 MMS19Q96T76 1030 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 NHEJ1Q9H9Q4 299 aaPredicted RBP18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 GCNT4Q9P109 453 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 KCNG1Q9UIX4 513 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 SAR1BQ9Y6B6 198 aa18.53■□□□□ 0.56
PCDHB17P-201ENST00000539533 H0YCG3 227 aa18.52■□□□□ 0.56
PCDHB17P-201ENST00000539533 ADRB2P07550 413 aa18.52■□□□□ 0.56
PCDHB17P-201ENST00000539533 ZNF286BP0CG31 522 aa18.52■□□□□ 0.56
PCDHB17P-201ENST00000539533 CCL14Q16627 93 aa18.52■□□□□ 0.56
PCDHB17P-201ENST00000539533 BRDTQ58F21 947 aaPredicted RBP18.52■□□□□ 0.56
PCDHB17P-201ENST00000539533 INTS8Q75QN2 995 aaKnown RBP18.52■□□□□ 0.56
PCDHB17P-201ENST00000539533 SMC1BQ8NDV3 1235 aa18.52■□□□□ 0.56
PCDHB17P-201ENST00000539533 POMGNT1Q8WZA1 660 aa18.52■□□□□ 0.56
PCDHB17P-201ENST00000539533 RNF216Q9NWF9 866 aaPredicted RBP18.52■□□□□ 0.56
PCDHB17P-201ENST00000539533 IGKV6-21A0A0C4DH24 114 aa18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 K7ERI5 159 aa18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 HBP1O60381 514 aa18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 KRT13P13646 458 aa18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 CYP2B6P20813 491 aa18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 MCM3P25205 808 aa18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 AARSP49588 968 aaKnown RBP eCLIP18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 SREBF2Q12772 1141 aa18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 KLHDC7AQ5VTJ3 777 aa18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 PAPD7Q5XG87 772 aaKnown RBP18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 PAXIP1Q6ZW49 1069 aaPredicted RBP18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 SIX2Q9NPC8 291 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms