RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 RIPOR2Q9Y4F9 1068 aa4□□□□□ -1.77
SNHG1-210ENST00000539303 RBM8AQ9Y5S9 174 aaKnown RBP4□□□□□ -1.77
SNHG1-210ENST00000539303 IRAK3Q9Y616 596 aa4□□□□□ -1.77
SNHG1-210ENST00000539303 RPTORQ8N122 1335 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 PLEKHD1A6NEE1 506 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 FFAR3O14843 346 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 MAFGO15525 162 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 DTNBO60941 627 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 ALDH1A2O94788 518 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 FTLP02792 175 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-210ENST00000539303 AMY1AP04745 511 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 SLC5A1P13866 664 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 FPR1P21462 350 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 SERPINB3P29508 390 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 ETV4P43268 484 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 MRE11P49959 708 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 BIRC2Q13490 618 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 HLTFQ14527 1009 aaKnown RBP eCLIP3.99□□□□□ -1.77
SNHG1-210ENST00000539303 SAFBQ15424 915 aaKnown RBP eCLIP3.99□□□□□ -1.77
SNHG1-210ENST00000539303 MST1LQ2TV78 715 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 ATG14Q6ZNE5 492 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 MIGA2Q7L4E1 593 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 SAPCD2Q86UD0 394 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 SKAP1Q86WV1 359 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 KIAA0319LQ8IZA0 1049 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 RTKN2Q8IZC4 609 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 UNC5BQ8IZJ1 945 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.99□□□□□ -1.77
SNHG1-210ENST00000539303 CCHCR1Q8TD31 782 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 NSUN6Q8TEA1 469 aaKnown RBP3.99□□□□□ -1.77
SNHG1-210ENST00000539303 SNX33Q8WV41 574 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 STON2Q8WXE9 905 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 RGMAQ96B86 450 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 YTHDC1Q96MU7 727 aaKnown RBP3.99□□□□□ -1.77
SNHG1-210ENST00000539303 UIMC1Q96RL1 719 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 VRK1Q99986 396 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-210ENST00000539303 C7orf25Q9BPX7 421 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 OSBPL6Q9BZF3 934 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 MYH16Q9H6N6 1097 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 L2HGDHQ9H9P8 463 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 TRPS1Q9UHF7 1281 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 USP25Q9UHP3 1055 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 FBXO10Q9UK96 956 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 POLHQ9Y253 713 aa3.99□□□□□ -1.77
SNHG1-210ENST00000539303 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 FSBPO95073 299 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 ZBED1O96006 694 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 CHGBP05060 677 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 NBPF7P0C2Y1 421 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-210ENST00000539303 C1QTNF9P0C862 333 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 GLDCP23378 1020 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 PCSK1P29120 753 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 ECHS1P30084 290 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 CSF2RBP32927 897 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 SREBF1P36956 1147 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 ZNF280AP59817 542 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-210ENST00000539303 ATP2C1P98194 919 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-210ENST00000539303 CNN3Q15417 329 aaKnown RBP3.98□□□□□ -1.77
SNHG1-210ENST00000539303 KIAA0753Q2KHM9 967 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 GORABQ5T7V8 394 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 Q6ZUG5 572 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 TAS1R1Q7RTX1 841 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 DRC7Q8IY82 874 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 PQLC1Q8N2U9 271 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 SH2D3CQ8N5H7 860 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 OR14K1Q8NGZ2 314 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 KLHDC4Q8TBB5 520 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 CLPTM1LQ96KA5 538 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 NAA15Q9BXJ9 866 aaKnown RBP3.98□□□□□ -1.77
SNHG1-210ENST00000539303 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 KATNBL1Q9H079 304 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 TMEM60Q9H2L4 133 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 ATP6V0A4Q9HBG4 840 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 FNIP2Q9P278 1114 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 PHTF1Q9UMS5 762 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 STXBP5LQ9Y2K9 1186 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 KCTD3Q9Y597 815 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 CTDP1Q9Y5B0 961 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-210ENST00000539303 PCDHA3Q9Y5H8 950 aa3.98□□□□□ -1.77
SNHG1-210ENST00000539303 LOC102724159A0A0B4J2E5 919 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 FAM171A2A8MVW0 826 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 FAM227AF5H4B4 570 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 ITGA10O75578 1167 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 CYP7B1O75881 506 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 TOX4O94842 621 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 LDHAP00338 332 aaKnown RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 CYP1A1P04798 512 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 MEOX1P50221 254 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 AGFG1P52594 562 aaKnown RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 ADAM8P78325 824 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 MEF2AQ02078 507 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 NOGQ13253 232 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 PICALMQ13492 652 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 SEMA5AQ13591 1074 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 PWP2Q15269 919 aaKnown RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 KHDC1Q4VXA5 237 aaKnown RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 AGBL4Q5VU57 503 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 EXOC8Q8IYI6 725 aa3.97□□□□□ -1.77
SNHG1-210ENST00000539303 TRMT2AQ8IZ69 625 aaKnown RBP3.97□□□□□ -1.77
SNHG1-210ENST00000539303 IFNL2Q8IZJ0 200 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms