RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 MMEP08473 750 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 PYGMP11217 842 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 CAP2P40123 477 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 GPC5P78333 572 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 MRPS9P82933 396 aaKnown RBP12.9□□□□□ -0.34
CPNE8-203ENST00000538596 DLGAP5Q15398 846 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 NSMFQ6X4W1 530 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 ARFGAP2Q8N6H7 521 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 XXYLT1Q8NBI6 393 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 EPS8L1Q8TE68 723 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 FAM151AQ8WW52 585 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 RNF25Q96BH1 459 aaPredicted RBP12.9□□□□□ -0.34
CPNE8-203ENST00000538596 PNMA2Q9UL42 364 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 PTPN22Q9Y2R2 807 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 GMNCA6NCL1 334 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 ANKRD63C9JTQ0 380 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 TRAPPC3O43617 180 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 EIF2AK2P19525 551 aaKnown RBP12.89□□□□□ -0.35
CPNE8-203ENST00000538596 MUTP22033 750 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 PTGIRP43119 386 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 RPL21P46778 160 aaKnown RBP12.89□□□□□ -0.35
CPNE8-203ENST00000538596 KCNJ1P48048 391 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 SOX10P56693 466 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 TRAF1Q13077 416 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 TKFCQ3LXA3 575 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 RHOT2Q8IXI1 618 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 ACCSQ96QU6 501 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 ZSWIM1Q9BR11 485 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 TOPORSQ9NS56 1045 aaPredicted RBP12.89□□□□□ -0.35
CPNE8-203ENST00000538596 DDX20Q9UHI6 824 aaKnown RBP12.89□□□□□ -0.35
CPNE8-203ENST00000538596 PHF20L1A8MW92 1017 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 ATP9AO75110 1047 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 ALAS1P13196 640 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 PLS3P13797 630 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 YWHABP31946 246 aaKnown RBP12.89□□□□□ -0.35
CPNE8-203ENST00000538596 FNTAP49354 379 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 MXI1P50539 228 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 HSD17B4P51659 736 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 SPRED3Q2MJR0 410 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 AGBL2Q5U5Z8 902 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 KCNV1Q6PIU1 500 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 GRHL1Q9NZI5 618 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 NOCTQ9UK39 431 aaKnown RBP12.89□□□□□ -0.35
CPNE8-203ENST00000538596 SYNPO2Q9UMS6 1093 aa12.89□□□□□ -0.35
CPNE8-203ENST00000538596 ADSSP30520 456 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 PEX5P50542 639 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 PMS2P54278 862 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 CETN1Q12798 172 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 CLEC4DQ8WXI8 215 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 DHX38Q92620 1227 aaKnown RBP12.88□□□□□ -0.35
CPNE8-203ENST00000538596 NAP1L3Q99457 506 aaPredicted RBP12.88□□□□□ -0.35
CPNE8-203ENST00000538596 PSMD1Q99460 953 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 ZNF341Q9BYN7 854 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 SEMA4AQ9H3S1 761 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 TMEM206Q9H813 350 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 AGO4Q9HCK5 861 aaKnown RBP12.88□□□□□ -0.35
CPNE8-203ENST00000538596 FEM1BQ9UK73 627 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 DIS3Q9Y2L1 958 aaKnown RBP12.88□□□□□ -0.35
CPNE8-203ENST00000538596 RPTORQ8N122 1335 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 PTGER2P43116 358 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 QARSP47897 775 aaKnown RBP12.88□□□□□ -0.35
CPNE8-203ENST00000538596 SLC29A2Q14542 456 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 FAM102BQ5T8I3 360 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 RSBN1LQ6PCB5 846 aaPredicted RBP12.88□□□□□ -0.35
CPNE8-203ENST00000538596 UBL4BQ8N7F7 174 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 EFCC1Q9HA90 598 aa12.88□□□□□ -0.35
CPNE8-203ENST00000538596 RAVER2Q9HCJ3 691 aaKnown RBP12.88□□□□□ -0.35
CPNE8-203ENST00000538596 ASTN2O75129 1339 aaPredicted RBP12.87□□□□□ -0.35
CPNE8-203ENST00000538596 PHF2O75151 1096 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 RTN2O75298 545 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 ICAM1P05362 532 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 MYCLP12524 364 aaPredicted RBP12.87□□□□□ -0.35
CPNE8-203ENST00000538596 FGFR4P22455 802 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 HNRNPH1P31943 449 aaKnown RBP12.87□□□□□ -0.35
CPNE8-203ENST00000538596 SLCO1A2P46721 670 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 FMO1Q01740 532 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 MTMR1Q13613 665 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 C11orf63Q6NUN7 778 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 CCDC137Q6PK04 289 aaKnown RBP12.87□□□□□ -0.35
CPNE8-203ENST00000538596 PHLDB2Q86SQ0 1253 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 FAM160B2Q86V87 743 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 CNKSR1Q969H4 720 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 TAAR1Q96RJ0 339 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 CAMKK2Q96RR4 588 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 NUP85Q9BW27 656 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 SYNGAP1Q96PV0 1343 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 CCDC169A6NNP5 214 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 H0YHG0 523 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 RFX1P22670 979 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 IFI35P80217 286 aaPredicted RBP12.87□□□□□ -0.35
CPNE8-203ENST00000538596 RASA3Q14644 834 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 C6orf89Q6UWU4 347 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 FAM71AQ8IYT1 594 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 TLCD1Q96CP7 247 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 PAGR1Q9BTK6 254 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 PABPC3Q9H361 631 aaKnown RBP12.87□□□□□ -0.35
CPNE8-203ENST00000538596 ZNF277Q9NRM2 450 aaPredicted RBP12.87□□□□□ -0.35
CPNE8-203ENST00000538596 GTF2BQ00403 316 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 BYSLQ13895 437 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms