RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 KRT12Q99456 494 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 UBAC1Q9BSL1 405 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 MMTAG2Q9BU76 263 aaKnown RBP7.25□□□□□ -1.25
USP28-207ENST00000538475 PLA2G12BQ9BX93 195 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 TRIM4Q9C037 500 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 LRRC27Q9C0I9 530 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 RXFP1Q9HBX9 757 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 JPH1Q9HDC5 661 aaPredicted RBP7.25□□□□□ -1.25
USP28-207ENST00000538475 SH3GLB2Q9NR46 395 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 AGPAT5Q9NUQ2 364 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 INTS9Q9NV88 658 aaKnown RBP7.25□□□□□ -1.25
USP28-207ENST00000538475 IRAK4Q9NWZ3 460 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 CEP72Q9P209 647 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 PDP2Q9P2J9 529 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 SIK3Q9Y2K2 1263 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 UTP11Q9Y3A2 253 aaKnown RBP7.25□□□□□ -1.25
USP28-207ENST00000538475 ALS2Q96Q42 1657 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 A0A0G2JLW4 131 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 PVALEFA0A1B0GWK0 134 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 TNFRSF10BO14763 440 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 RAD51CO43502 376 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 CREB3O43889 395 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 KLRC4O43908 158 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 RGS9O75916 674 aaPredicted RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 RNF8O76064 485 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 GNA14O95837 355 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 MMEP08473 750 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 GNAT1P11488 350 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 CPB1P15086 417 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 GNAZP19086 355 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 PEX19P40855 299 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 STAT6P42226 847 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 MATR3P43243 847 aaKnown RBP eCLIP7.24□□□□□ -1.25
USP28-207ENST00000538475 ALDH5A1P51649 535 aaPredicted RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 GUCY2FP51841 1108 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 MAGOHP61326 146 aaKnown RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 CYP27A1Q02318 531 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 PPARAQ07869 468 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 PSMD2Q13200 908 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 MTA1Q13330 715 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 TMED1Q13445 227 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 DHX34Q14147 1143 aaKnown RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 SLC18A3Q16572 532 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 MIIPQ5JXC2 388 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 CENPPQ6IPU0 288 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 PSAPL1Q6NUJ1 521 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 ZNF790Q6PG37 636 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 MFSD6Q6ZSS7 791 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 TBC1D1Q86TI0 1168 aaPredicted RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 C2CD5Q86YS7 1000 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 TBC1D10CQ8IV04 446 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 ABTB2Q8N961 1025 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 SMC1BQ8NDV3 1235 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 B4GALNT2Q8NHY0 566 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 TBC1D16Q8TBP0 767 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 IRGQQ8WZA9 623 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 NCSTNQ92542 709 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 MAGOHBQ96A72 148 aaKnown RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 RBM41Q96IZ5 413 aaKnown RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 CNOT6LQ96LI5 555 aaKnown RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 DUSP9Q99956 384 aaKnown RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 C7orf25Q9BPX7 421 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.24□□□□□ -1.25
USP28-207ENST00000538475 TUBB6Q9BUF5 446 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 NACAP1Q9BZK3 213 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 YIPF3Q9GZM5 350 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 MIS12Q9H081 205 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 PABPC3Q9H361 631 aaKnown RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 ECT2Q9H8V3 914 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 RNPEPL1Q9HAU8 725 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 RIC8AQ9NPQ8 531 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 PRDM6Q9NQX0 595 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 DISC1Q9NRI5 854 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 PANK4Q9NVE7 773 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 IL1RAPL1Q9NZN1 696 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 VPS54Q9P1Q0 977 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 SUCLA2Q9P2R7 463 aaPredicted RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 CNOT8Q9UFF9 292 aaKnown RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 SEPT3Q9UH03 358 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 SCOCQ9UIL1 159 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 ANAPC4Q9UJX5 808 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 FBXL5Q9UKA1 691 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 ITGB1BP2Q9UKP3 347 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 LRCH1Q9Y2L9 728 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 NOC2LQ9Y3T9 749 aaKnown RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 TBX22Q9Y458 520 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 DAAM1Q9Y4D1 1078 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.24□□□□□ -1.25
USP28-207ENST00000538475 DUSP10Q9Y6W6 482 aa7.24□□□□□ -1.25
USP28-207ENST00000538475 RGPD5Q99666 1765 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 FRMD3A2A2Y4 597 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 B4E1Z4 1266 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 TRAFD1O14545 582 aaPredicted RBP7.23□□□□□ -1.25
USP28-207ENST00000538475 SLC26A4O43511 780 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 ECE2O60344 883 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 DDAH1O94760 285 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 KIF4AO95239 1232 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 RAPGEF3O95398 923 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 EGFRP00533 1210 aa7.23□□□□□ -1.25
USP28-207ENST00000538475 TMOD1P28289 359 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms