RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CA4P22748 312 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 ULK4Q96C45 1275 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 TMEM39BQ9GZU3 492 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 ZNF70Q9UC06 446 aaPredicted RBP11.91□□□□□ -0.5
LINC00346-201ENST00000538077 FOXN1O15353 648 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 STMN1P16949 149 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 STAT5BP51692 787 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 BAATQ14032 418 aaPredicted RBP11.91□□□□□ -0.5
LINC00346-201ENST00000538077 PLA2G4FQ68DD2 849 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 HEATR6Q6AI08 1181 aaKnown RBP11.9□□□□□ -0.5
LINC00346-201ENST00000538077 GLI2P10070 1586 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 TMEM247A6NEH6 219 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 PRRG1O14668 218 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 FTLP02792 175 aaPredicted RBP11.9□□□□□ -0.5
LINC00346-201ENST00000538077 DPEP1P16444 411 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 GMPSP49915 693 aaPredicted RBP11.9□□□□□ -0.5
LINC00346-201ENST00000538077 C1orf54Q8WWF1 131 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 CPA5Q8WXQ8 436 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 ADAM33Q9BZ11 813 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 ARL4CP56559 192 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 GPS1Q13098 491 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
LINC00346-201ENST00000538077 ZNF235Q14590 738 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 APPL2Q8NEU8 664 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 CERKQ8TCT0 537 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 NEK9Q8TD19 979 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 OTULINQ96BN8 352 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 PARD6BQ9BYG5 372 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 MUC3BQ9H195 1237 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 PLEKHA5Q9HAU0 1116 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 GGPS1O95749 300 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 GYS2P54840 703 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 DDIASQ8IXT1 998 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 LRRC71Q8N4P6 559 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 TTC8Q8TAM2 541 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 ABHD10Q9NUJ1 306 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 STRIP2Q9ULQ0 834 aa11.9□□□□□ -0.5
LINC00346-201ENST00000538077 PHLPP2Q6ZVD8 1323 aa11.9□□□□□ -0.51
LINC00346-201ENST00000538077 CYP26A1O43174 497 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 OR1G1P47890 313 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 COPS2P61201 443 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 GABPB1Q06547 395 aaPredicted RBP11.89□□□□□ -0.51
LINC00346-201ENST00000538077 CRLF3Q8IUI8 442 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 ANKMY2Q8IV38 441 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 RHOT2Q8IXI1 618 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 SLC30A5Q8TAD4 765 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 KIAA1586Q9HCI6 787 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 AGAP1Q9UPQ3 857 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 PCDHB7Q9Y5E2 793 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 FLT1P17948 1338 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 CCL15-CCL14A0A0B4J2E2 113 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 ADRA2BP18089 450 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 CCL15Q16663 113 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 CDC42EP5Q6NZY7 148 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 SRBD1Q8N5C6 995 aaKnown RBP11.89□□□□□ -0.51
LINC00346-201ENST00000538077 OR6P1Q8NGX9 317 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 RBM41Q96IZ5 413 aaKnown RBP11.89□□□□□ -0.51
LINC00346-201ENST00000538077 CHGBP05060 677 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 PPP1R18Q6NYC8 613 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 NFRKBQ6P4R8 1299 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 PPM1NQ8N819 430 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 VPS39Q96JC1 886 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 AGAP3Q96P47 875 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 FAF1Q9UNN5 650 aaPredicted RBP11.89□□□□□ -0.51
LINC00346-201ENST00000538077 L3MBTL1Q9Y468 752 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 DAGLAQ9Y4D2 1042 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 GRAP2O75791 330 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 PTK2BQ14289 1009 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 PCSK7Q16549 785 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 MGAT5BQ3V5L5 792 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 MB21D2Q8IYB1 491 aaPredicted RBP11.89□□□□□ -0.51
LINC00346-201ENST00000538077 ZNF280CQ8ND82 737 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 PANX2Q96RD6 677 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 ABCB6Q9NP58 842 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 SCHIP1Q9P0W5 487 aaPredicted RBP11.89□□□□□ -0.51
LINC00346-201ENST00000538077 IP6K2Q9UHH9 426 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 ARHGAP31Q2M1Z3 1444 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 CDHR2Q9BYE9 1310 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 HSPA6P17066 643 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 HUNKP57058 714 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 PRAMEP78395 509 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 SYTL3Q4VX76 610 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 PAN2Q504Q3 1202 aaKnown RBP11.89□□□□□ -0.51
LINC00346-201ENST00000538077 DRC3Q9H069 523 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 MED4Q9NPJ6 270 aa11.89□□□□□ -0.51
LINC00346-201ENST00000538077 RNF17Q9BXT8 1623 aaKnown RBP11.89□□□□□ -0.51
LINC00346-201ENST00000538077 RPAP1Q9BWH6 1393 aaPredicted RBP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 TBXAS1P24557 533 aaPredicted RBP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 PRR5LQ6MZQ0 368 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 FAM47EQ6ZV65 393 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 TEKT4Q8WW24 435 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 RABGGTAQ92696 567 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 FAM20AQ96MK3 541 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 PARK7Q99497 189 aaKnown RBP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 MYOZ2Q9NPC6 264 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 DOLKQ9UPQ8 538 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 FAM95CA0A1B0GW59 222 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 APOL1O14791 398 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 ESRRAP11474 423 aaPredicted RBP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 ETFBP38117 255 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms