RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 TAF4BQ92750 862 aa10.08□□□□□ -0.8
UBE3B-207ENST00000537063 KREMEN1Q96MU8 473 aa10.08□□□□□ -0.8
UBE3B-207ENST00000537063 KIFC3Q9BVG8 833 aa10.08□□□□□ -0.8
UBE3B-207ENST00000537063 UBE2TQ9NPD8 197 aaPredicted RBP10.08□□□□□ -0.8
UBE3B-207ENST00000537063 H0YCG3 227 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 AGPSO00116 658 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 KCNK3O14649 394 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 PIGRP01833 764 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 ATP4AP20648 1035 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 CYP24A1Q07973 514 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 C15orf39Q6ZRI6 1047 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 RIOX2Q8IUF8 465 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 SEMA4DQ92854 862 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 TAS2R14Q9NYV8 317 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 CCDC169A6NNP5 214 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 DDX3YO15523 660 aaKnown RBP10.07□□□□□ -0.8
UBE3B-207ENST00000537063 GLI1P08151 1106 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 CHRNB2P17787 502 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 ARHGAP44Q17R89 818 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 KRT39Q6A163 491 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 HELQQ8TDG4 1101 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 EPS8L1Q8TE68 723 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 SLC20A1Q8WUM9 679 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 ARHGEF26Q96DR7 871 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.07□□□□□ -0.83e-6■■■■■ 30.2
UBE3B-207ENST00000537063 ZMYND15Q9H091 742 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 GOLPH3Q9H4A6 298 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 DIS3Q9Y2L1 958 aaKnown RBP10.07□□□□□ -0.8
UBE3B-207ENST00000537063 BUB1BO60566 1050 aaPredicted RBP10.07□□□□□ -0.8
UBE3B-207ENST00000537063 TNFAIP3P21580 790 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 NOP2P46087 812 aaKnown RBP10.07□□□□□ -0.8
UBE3B-207ENST00000537063 SLC7A5Q01650 507 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 STXBP2Q15833 593 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 TREML2Q5T2D2 321 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 C11orf63Q6NUN7 778 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 PEX26Q7Z412 305 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 MREGQ8N565 214 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 CTNNBL1Q8WYA6 563 aaPredicted RBP10.07□□□□□ -0.8
UBE3B-207ENST00000537063 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.07□□□□□ -0.8
UBE3B-207ENST00000537063 NIFKQ9BYG3 293 aaKnown RBP10.07□□□□□ -0.8
UBE3B-207ENST00000537063 DHX33Q9H6R0 707 aaKnown RBP10.07□□□□□ -0.8
UBE3B-207ENST00000537063 OSGEPQ9NPF4 335 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 KCNG1Q9UIX4 513 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 ADAM21Q9UKJ8 722 aa10.07□□□□□ -0.8
UBE3B-207ENST00000537063 PGRMC1O00264 195 aaKnown RBP10.06□□□□□ -0.8
UBE3B-207ENST00000537063 IRF6O14896 467 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 MATR3P43243 847 aaKnown RBP eCLIP10.06□□□□□ -0.8
UBE3B-207ENST00000537063 ALDH5A1P51649 535 aaPredicted RBP10.06□□□□□ -0.8
UBE3B-207ENST00000537063 SOX10P56693 466 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 TNNC1P63316 161 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 RHOT2Q8IXI1 618 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 IFT20Q8IY31 132 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 ZNF526Q8TF50 670 aaPredicted RBP10.06□□□□□ -0.8
UBE3B-207ENST00000537063 SH3GL2Q99962 352 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 FBXO40Q9UH90 709 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 SEPT9Q9UHD8 586 aaPredicted RBP10.06□□□□□ -0.8
UBE3B-207ENST00000537063 COG5Q9UP83 839 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 GOLGA8IPA6NC78 632 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 GOLGA8JA6NMD2 632 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 GZMAP12544 262 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 TNNT3P45378 269 aaPredicted RBP10.06□□□□□ -0.8
UBE3B-207ENST00000537063 EMC2Q15006 297 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 GPD1LQ8N335 351 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 SAAL1Q96ER3 474 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 THAP2Q9H0W7 228 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 POLR3FQ9H1D9 316 aaPredicted RBP10.06□□□□□ -0.8
UBE3B-207ENST00000537063 BTBD7Q9P203 1132 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 FAN1Q9Y2M0 1017 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 NOC2LQ9Y3T9 749 aaKnown RBP10.06□□□□□ -0.8
UBE3B-207ENST00000537063 CCDC188H7C350 402 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 KIAA0391O15091 583 aaKnown RBP10.06□□□□□ -0.8
UBE3B-207ENST00000537063 ZC3H11AO75152 810 aaKnown RBP eCLIP10.06□□□□□ -0.8
UBE3B-207ENST00000537063 OATP04181 439 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 ARL2P36404 184 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 MFAP3P55082 362 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 DCAF12L1Q5VU92 463 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 ZNF771Q7L3S4 317 aaPredicted RBP10.06□□□□□ -0.8
UBE3B-207ENST00000537063 DAAM2Q86T65 1068 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 NOP9Q86U38 636 aaKnown RBP10.06□□□□□ -0.8
UBE3B-207ENST00000537063 KAT5Q92993 513 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 KRT12Q99456 494 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 PORCNQ9H237 461 aa10.06□□□□□ -0.8
UBE3B-207ENST00000537063 A0A0G2JLL6 359 aaPredicted RBP10.05□□□□□ -0.8
UBE3B-207ENST00000537063 RAD51CO43502 376 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 HEXIM1O94992 359 aaKnown RBP10.05□□□□□ -0.8
UBE3B-207ENST00000537063 MAP2K1Q02750 393 aaPredicted RBP10.05□□□□□ -0.8
UBE3B-207ENST00000537063 FSTL1Q12841 308 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 TARBP2Q15633 366 aaKnown RBP10.05□□□□□ -0.8
UBE3B-207ENST00000537063 PRRT2Q7Z6L0 340 aaPredicted RBP10.05□□□□□ -0.8
UBE3B-207ENST00000537063 USP37Q86T82 979 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 PROCA1Q8NCQ7 364 aaPredicted RBP10.05□□□□□ -0.8
UBE3B-207ENST00000537063 FBXL13Q8NEE6 735 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 AFAP1L1Q8TED9 768 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 PCDHB18PQ96TA0 734 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 AMFRQ9UKV5 643 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 ZSWIM8A7E2V4 1837 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 RTN2O75298 545 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 CNTN2Q02246 1040 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 PAK2Q13177 524 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 PRPF4BQ13523 1007 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms