RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 POU3F2P20265 443 aaPredicted RBP7.53□□□□□ -1.2
CCDC7-208ENST00000537047 KPNA1P52294 538 aaPredicted RBP7.53□□□□□ -1.2
CCDC7-208ENST00000537047 DUSP2Q05923 314 aa7.53□□□□□ -1.2
CCDC7-208ENST00000537047 UBE3CQ15386 1083 aa7.53□□□□□ -1.2
CCDC7-208ENST00000537047 ANKS6Q68DC2 871 aa7.53□□□□□ -1.2
CCDC7-208ENST00000537047 ZMYM3Q14202 1370 aa7.53□□□□□ -1.2
CCDC7-208ENST00000537047 NCR1O76036 304 aa7.52□□□□□ -1.21
CCDC7-208ENST00000537047 GYPEP15421 78 aa7.52□□□□□ -1.21
CCDC7-208ENST00000537047 LAG3P18627 525 aa7.52□□□□□ -1.21
CCDC7-208ENST00000537047 GZMKP49863 264 aa7.52□□□□□ -1.21
CCDC7-208ENST00000537047 PPARAQ07869 468 aa7.52□□□□□ -1.21
CCDC7-208ENST00000537047 TRIM25Q14258 630 aaKnown RBP7.52□□□□□ -1.21
CCDC7-208ENST00000537047 HECTD2Q5U5R9 776 aa7.52□□□□□ -1.21
CCDC7-208ENST00000537047 PASD1Q8IV76 773 aa7.52□□□□□ -1.21
CCDC7-208ENST00000537047 DHX37Q8IY37 1157 aaKnown RBP7.52□□□□□ -1.21
CCDC7-208ENST00000537047 GLB1L3Q8NCI6 653 aaPredicted RBP7.52□□□□□ -1.21
CCDC7-208ENST00000537047 VOPP1Q96AW1 172 aa7.52□□□□□ -1.21
CCDC7-208ENST00000537047 PDCD2LQ9BRP1 358 aa7.52□□□□□ -1.21
CCDC7-208ENST00000537047 EVLQ9UI08 416 aaPredicted RBP7.52□□□□□ -1.21
CCDC7-208ENST00000537047 HDAC5Q9UQL6 1122 aa7.52□□□□□ -1.21
CCDC7-208ENST00000537047 TERF2Q15554 542 aa7.51□□□□□ -1.21
CCDC7-208ENST00000537047 TCEA2Q15560 299 aa7.51□□□□□ -1.21
CCDC7-208ENST00000537047 GPRIN1Q7Z2K8 1008 aa7.51□□□□□ -1.21
CCDC7-208ENST00000537047 TARS2Q9BW92 718 aaKnown RBP7.51□□□□□ -1.21
CCDC7-208ENST00000537047 SPON1Q9HCB6 807 aa7.51□□□□□ -1.21
CCDC7-208ENST00000537047 USP36Q9P275 1121 aaKnown RBP7.51□□□□□ -1.21
CCDC7-208ENST00000537047 CHST2Q9Y4C5 530 aa7.51□□□□□ -1.21
CCDC7-208ENST00000537047 B3GALT2O43825 422 aa7.5□□□□□ -1.21
CCDC7-208ENST00000537047 ZEB1P37275 1124 aaPredicted RBP7.5□□□□□ -1.21
CCDC7-208ENST00000537047 RNASE9P60153 205 aaKnown RBP7.5□□□□□ -1.21
CCDC7-208ENST00000537047 BTNL9Q6UXG8 535 aa7.5□□□□□ -1.21
CCDC7-208ENST00000537047 ABHD15Q6UXT9 468 aa7.5□□□□□ -1.21
CCDC7-208ENST00000537047 DOK3Q7L591 496 aa7.5□□□□□ -1.21
CCDC7-208ENST00000537047 GDF7Q7Z4P5 450 aa7.5□□□□□ -1.21
CCDC7-208ENST00000537047 ZNF610Q8N9Z0 462 aa7.5□□□□□ -1.21
CCDC7-208ENST00000537047 NTN5Q8WTR8 489 aaPredicted RBP7.5□□□□□ -1.21
CCDC7-208ENST00000537047 MYEOVQ96EZ4 313 aa7.5□□□□□ -1.21
CCDC7-208ENST00000537047 SLC46A2Q9BY10 475 aa7.5□□□□□ -1.21
CCDC7-208ENST00000537047 WDR11Q9BZH6 1224 aa7.5□□□□□ -1.21
CCDC7-208ENST00000537047 RIOX1Q9H6W3 641 aa7.5□□□□□ -1.21
CCDC7-208ENST00000537047 SYNPO2LQ9H987 977 aa7.5□□□□□ -1.21
CCDC7-208ENST00000537047 AKIP1Q9NQ31 210 aa7.5□□□□□ -1.21
CCDC7-208ENST00000537047 ZNHIT2Q9UHR6 403 aa7.5□□□□□ -1.21
CCDC7-208ENST00000537047 ZNF185O15231 689 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 NDUFA10O95299 355 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 ADCYAP1R1P41586 468 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 IL12RB1P42701 662 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 MANFP55145 182 aaKnown RBP7.49□□□□□ -1.21
CCDC7-208ENST00000537047 WNT3AP56704 352 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 PHC1P78364 1004 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 METTL24Q5JXM2 366 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 GPR158Q5T848 1215 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 OLFML1Q6UWY5 402 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 LMBR1LQ6UX01 489 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 Q6YL49 198 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 SLC41A1Q8IVJ1 513 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 NINJ1Q92982 152 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 SERHL2Q9H4I8 314 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 FANCLQ9NW38 375 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 PRSS50Q9UI38 385 aa7.49□□□□□ -1.21
CCDC7-208ENST00000537047 TMEM127O75204 238 aa7.48□□□□□ -1.21
CCDC7-208ENST00000537047 RHOBTB3O94955 611 aa7.48□□□□□ -1.21
CCDC7-208ENST00000537047 XPAP23025 273 aaPredicted RBP7.48□□□□□ -1.21
CCDC7-208ENST00000537047 CANXP27824 592 aaKnown RBP7.48□□□□□ -1.21
CCDC7-208ENST00000537047 NHLH2Q02577 135 aa7.48□□□□□ -1.21
CCDC7-208ENST00000537047 HNRNPA0Q13151 305 aaKnown RBP7.48□□□□□ -1.21
CCDC7-208ENST00000537047 RNF169Q8NCN4 708 aa7.48□□□□□ -1.21
CCDC7-208ENST00000537047 EDARQ9UNE0 448 aa7.48□□□□□ -1.21
CCDC7-208ENST00000537047 NUMBLQ9Y6R0 609 aa7.48□□□□□ -1.21
CCDC7-208ENST00000537047 UNC119BA6NIH7 251 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 TMEM200CA6NKL6 621 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 PRR5-ARHGAP8B1AHC4 643 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 PRAMEF4O60810 478 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 FBLP22087 321 aaKnown RBP7.47□□□□□ -1.21
CCDC7-208ENST00000537047 LSP1P33241 339 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 APBA1Q02410 837 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 CCDC62Q6P9F0 684 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 HOMER1Q86YM7 354 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 NIM1KQ8IY84 436 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 SYNPOQ8N3V7 929 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 MDM1Q8TC05 714 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 CEP95Q96GE4 821 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 TOR3AQ9H497 397 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.47□□□□□ -1.21
CCDC7-208ENST00000537047 DKK2Q9UBU2 259 aa7.47□□□□□ -1.21
CCDC7-208ENST00000537047 KIAA0355O15063 1070 aa7.46□□□□□ -1.22
CCDC7-208ENST00000537047 KDM1AO60341 852 aa7.46□□□□□ -1.22
CCDC7-208ENST00000537047 LPLP06858 475 aa7.46□□□□□ -1.22
CCDC7-208ENST00000537047 HSP90B1P14625 803 aaKnown RBP7.46□□□□□ -1.22
CCDC7-208ENST00000537047 ZSCAN20P17040 1043 aaPredicted RBP7.46□□□□□ -1.22
CCDC7-208ENST00000537047 GPR15P49685 360 aa7.46□□□□□ -1.22
CCDC7-208ENST00000537047 CLK3P49761 638 aaKnown RBP7.46□□□□□ -1.22
CCDC7-208ENST00000537047 IL2P60568 153 aa7.46□□□□□ -1.22
CCDC7-208ENST00000537047 PDCD4Q53EL6 469 aaKnown RBP7.46□□□□□ -1.22
CCDC7-208ENST00000537047 PITRM1Q5JRX3 1037 aa7.46□□□□□ -1.22
CCDC7-208ENST00000537047 BROXQ5VW32 411 aa7.46□□□□□ -1.22
CCDC7-208ENST00000537047 IQSEC1Q6DN90 963 aa7.46□□□□□ -1.22
CCDC7-208ENST00000537047 C16orf86Q6ZW13 317 aa7.46□□□□□ -1.22
CCDC7-208ENST00000537047 OR10H5Q8NGA6 315 aa7.46□□□□□ -1.22
CCDC7-208ENST00000537047 PRDM13Q9H4Q3 707 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms