RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PRKCBP05771 671 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 MARCKSP29966 332 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-206ENST00000536398 SLC11A1P49279 550 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 ALDH7A1P49419 539 aaKnown RBP15.76■□□□□ 0.11
UBE3B-206ENST00000536398 PEX3P56589 373 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 CEBPZQ03701 1054 aaKnown RBP15.76■□□□□ 0.11
UBE3B-206ENST00000536398 RNASELQ05823 741 aaKnown RBP15.76■□□□□ 0.11
UBE3B-206ENST00000536398 CLUL1Q15846 466 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 MAPK6Q16659 721 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 FAM187BQ17R55 369 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 SPECC1Q5M775 1068 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 EEF1DP3Q658K8 133 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 IFT74Q96LB3 600 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 ZFP42Q96MM3 310 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 UHRF1Q96T88 793 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-206ENST00000536398 C2orf40Q9H1Z8 148 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 PDZD7Q9H5P4 517 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 TLE6Q9H808 572 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 PRMT7Q9NVM4 692 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-206ENST00000536398 KLK14Q9P0G3 267 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 LZTS1Q9Y250 596 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 CNTNAP2Q9UHC6 1331 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 CCDC169A6NNP5 214 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 STX6O43752 255 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 TBX10O75333 385 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 PLA2G4BP0C869 781 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 IL9P15248 144 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 MLH1P40692 756 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 NPTX2P47972 431 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 SLC12A3P55017 1021 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 CACNB1Q02641 598 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-206ENST00000536398 KRT17Q04695 432 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 ADAM15Q13444 863 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 PRPF4BQ13523 1007 aaKnown RBP15.75■□□□□ 0.11
UBE3B-206ENST00000536398 NT5DC1Q5TFE4 455 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 SLC27A1Q6PCB7 646 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 USP49Q70CQ1 688 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 SYT2Q8N9I0 419 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-206ENST00000536398 CNNM3Q8NE01 707 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 VN1R2Q8NFZ6 395 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 URGCPQ8TCY9 931 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 CDK5RAP3Q96JB5 506 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 PRIMPOLQ96LW4 560 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 TCF25Q9BQ70 676 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 VN1R3Q9BXE9 311 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 TRIM6Q9C030 488 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-206ENST00000536398 CXCL16Q9H2A7 254 aa15.75■□□□□ 0.11
UBE3B-206ENST00000536398 PUF60Q9UHX1 559 aaKnown RBP15.75■□□□□ 0.11
UBE3B-206ENST00000536398 ACKR2O00590 384 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 GLP2RO95838 553 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 BMP15O95972 392 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 PPM1AP35813 382 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 LONP1P36776 959 aaKnown RBP15.74■□□□□ 0.11
UBE3B-206ENST00000536398 UBA7P41226 1012 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 SCNN1GP51170 649 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 DHX8Q14562 1220 aaKnown RBP15.74■□□□□ 0.11
UBE3B-206ENST00000536398 KARSQ15046 597 aaKnown RBP15.74■□□□□ 0.11
UBE3B-206ENST00000536398 PPP2R5AQ15172 486 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 TMEM132AQ24JP5 1023 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 ARSHQ5FYA8 562 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 FOXD4L5Q5VV16 416 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-206ENST00000536398 PTCRAQ6ISU1 281 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-206ENST00000536398 TAS1R3Q7RTX0 852 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 HSCBQ8IWL3 235 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 SPRYD3Q8NCJ5 442 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 GSTCDQ8NEC7 633 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 FOXD4L4Q8WXT5 416 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-206ENST00000536398 AUTS2Q8WXX7 1259 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 IGSF21Q96ID5 467 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 EPSTI1Q96J88 318 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 AK8Q96MA6 479 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 CLIC6Q96NY7 704 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 USP28Q96RU2 1077 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 NT5C3AQ9H0P0 336 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 ENTPD7Q9NQZ7 604 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 BLOC1S4Q9NUP1 217 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 CLEC1BQ9P126 229 aa15.74■□□□□ 0.11
UBE3B-206ENST00000536398 FBXO2Q9UK22 296 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-206ENST00000536398 CUL9Q8IWT3 2517 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 TTC28Q96AY4 2481 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 GRXCR2A6NFK2 248 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 F8W810 466 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 SLC16A4O15374 487 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 NCK2O43639 380 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 GUCY2CP25092 1073 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 TMC7Q7Z402 723 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 EFHBQ8N7U6 833 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 FAM193BQ96PV7 902 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-206ENST00000536398 UBN1Q9NPG3 1134 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 KMT5AQ9NQR1 393 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 SNTG2Q9NY99 539 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 KANSL3Q9P2N6 904 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 PARP2Q9UGN5 583 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 BARX2Q9UMQ3 279 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-206ENST00000536398 GIT1Q9Y2X7 761 aa15.73■□□□□ 0.11
UBE3B-206ENST00000536398 K7ERI5 159 aa15.72■□□□□ 0.11
UBE3B-206ENST00000536398 TNFRSF10AO00220 468 aa15.72■□□□□ 0.11
UBE3B-206ENST00000536398 NRP1O14786 923 aa15.72■□□□□ 0.11
UBE3B-206ENST00000536398 N4BP3O15049 544 aa15.72■□□□□ 0.11
UBE3B-206ENST00000536398 INPPL1O15357 1258 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms