RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CLASP2O75122 1294 aaKnown RBP15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 NPTXRO95502 500 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 SSBP05455 408 aaKnown RBP eCLIP15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 LIG1P18858 919 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 FXR2P51116 673 aaKnown RBP eCLIP15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 KCNC3Q14003 757 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 ECM1Q16610 540 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 TMEM184AQ6ZMB5 413 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 TMX3Q96JJ7 454 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 GAD1Q99259 594 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 NFKBIZQ9BYH8 718 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 NXF3Q9H4D5 531 aaKnown RBP15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 POLD4Q9HCU8 107 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 UBN1Q9NPG3 1134 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 FAN1Q9Y2M0 1017 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 KIF3AQ9Y496 699 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 HCFC2Q9Y5Z7 792 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 C5orf42Q9H799 3197 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 NRP1O14786 923 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 ALDH2P05091 517 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 CTSAP10619 480 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 CYP11B2P19099 503 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 AKAP5P24588 427 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 GJB2P29033 226 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 SCNN1GP51170 649 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 TMEM132AQ24JP5 1023 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 SLC27A1Q6PCB7 646 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 SYCE2Q6PIF2 218 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 RNF135Q8IUD6 432 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 ZBTB8OSQ8IWT0 167 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 SNX29Q8TEQ0 813 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 BSNDQ8WZ55 320 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 CASP10Q92851 521 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 RPGRIP1Q96KN7 1286 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 ZFP42Q96MM3 310 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 TMEM175Q9BSA9 504 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 VN1R3Q9BXE9 311 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 S1PR5Q9H228 398 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 BHMT2Q9H2M3 363 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 PRMT7Q9NVM4 692 aaPredicted RBP15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 MUTYHQ9UIF7 546 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 KIAA1024Q9UPX6 916 aa15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 PRG3Q9Y2Y8 225 aaPredicted RBP15.82■□□□□ 0.12
RTN3P1-201ENST00000536295 OR1G1P47890 313 aa15.81■□□□□ 0.12
RTN3P1-201ENST00000536295 CDCA2Q69YH5 1023 aaPredicted RBP15.81■□□□□ 0.12
RTN3P1-201ENST00000536295 HACE1Q8IYU2 909 aa15.81■□□□□ 0.12
RTN3P1-201ENST00000536295 DEPTORQ8TB45 409 aa15.81■□□□□ 0.12
RTN3P1-201ENST00000536295 SUSD6Q92537 303 aa15.81■□□□□ 0.12
RTN3P1-201ENST00000536295 PHF7Q9BWX1 381 aaPredicted RBP15.81■□□□□ 0.12
RTN3P1-201ENST00000536295 RAB34Q9BZG1 259 aa15.81■□□□□ 0.12
RTN3P1-201ENST00000536295 DDX19AQ9NUU7 478 aaKnown RBP15.81■□□□□ 0.12
RTN3P1-201ENST00000536295 MIOSQ9NXC5 875 aa15.81■□□□□ 0.12
RTN3P1-201ENST00000536295 KLK14Q9P0G3 267 aa15.81■□□□□ 0.12
RTN3P1-201ENST00000536295 PARP2Q9UGN5 583 aa15.81■□□□□ 0.12
RTN3P1-201ENST00000536295 CDH22Q9UJ99 828 aa15.81■□□□□ 0.12
RTN3P1-201ENST00000536295 USP20Q9Y2K6 914 aa15.81■□□□□ 0.12
RTN3P1-201ENST00000536295 A0A1B0GUA9 196 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 TTLL13PA6NNM8 815 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 PP2D1A8MPX8 630 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 H3BQV1 296 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 HOXB8P17481 243 aaPredicted RBP15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 MUTP22033 750 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 SP100P23497 879 aaPredicted RBP15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 CDC25AP30304 524 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 PDIA5Q14554 519 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 CBX2Q14781 532 aaPredicted RBP15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 PTPN14Q15678 1187 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 TPRNQ4KMQ1 711 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 PPP4R3CPQ6ZMV5 832 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 COLGALT2Q8IYK4 626 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 IGSF22Q8N9C0 903 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 KIFC3Q9BVG8 833 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 C2orf40Q9H1Z8 148 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 GIT1Q9Y2X7 761 aa15.8■□□□□ 0.12
RTN3P1-201ENST00000536295 LOC730098B7Z3J9 87 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 E9PMD0 336 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 C2CD2LO14523 706 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 PRKCBP05771 671 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 EPCAMP16422 314 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 NAMPTP43490 491 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 PRPF4BQ13523 1007 aaKnown RBP15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 GIT2Q14161 759 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 ZRSR1Q15695 479 aaKnown RBP15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 IL17AQ16552 155 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 MAPK6Q16659 721 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 KRT79Q5XKE5 535 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 DTHD1Q6ZMT9 781 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 C12orf76Q8N812 135 aaPredicted RBP15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 IFT74Q96LB3 600 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 PRIMPOLQ96LW4 560 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 TBC1D32Q96NH3 1257 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 FZD8Q9H461 694 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 MARCH5Q9NX47 278 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 SMC3Q9UQE7 1217 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 IRAK3Q9Y616 596 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 STK24Q9Y6E0 443 aa15.79■□□□□ 0.12
RTN3P1-201ENST00000536295 PRR33A8MZF0 331 aa15.78■□□□□ 0.12
RTN3P1-201ENST00000536295 F8W810 466 aa15.78■□□□□ 0.12
RTN3P1-201ENST00000536295 LAD1O00515 517 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms