RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 H0Y3Z8 333 aa15.04■□□□□ -0
LIG1-203ENST00000536218 EPHB6O15197 1021 aa15.04■□□□□ -0
LIG1-203ENST00000536218 CREB3O43889 395 aa15.04■□□□□ -0
LIG1-203ENST00000536218 PALMO75781 387 aa15.04■□□□□ -0
LIG1-203ENST00000536218 RSPH10BP0C881 870 aa15.04■□□□□ -0
LIG1-203ENST00000536218 GFPT1Q06210 699 aaPredicted RBP15.04■□□□□ -0
LIG1-203ENST00000536218 DHX9Q08211 1270 aaKnown RBP15.04■□□□□ -0
LIG1-203ENST00000536218 MBOAT7Q96N66 472 aa15.04■□□□□ -0
LIG1-203ENST00000536218 WDR18Q9BV38 432 aa15.04■□□□□ -0
LIG1-203ENST00000536218 TRIM31Q9BZY9 425 aa15.04■□□□□ -0
LIG1-203ENST00000536218 EMILIN3Q9NT22 766 aa15.04■□□□□ -0
LIG1-203ENST00000536218 NKX1-2Q9UD57 310 aaPredicted RBP15.04■□□□□ -0
LIG1-203ENST00000536218 PNMA3Q9UL41 463 aa15.04■□□□□ -0
LIG1-203ENST00000536218 ZNF232Q9UNY5 417 aa15.04■□□□□ -0
LIG1-203ENST00000536218 IMPDH2P12268 514 aa15.03■□□□□ -0
LIG1-203ENST00000536218 DBN1Q16643 649 aa15.03■□□□□ -0
LIG1-203ENST00000536218 Q4G0T1 1027 aa15.03■□□□□ -0
LIG1-203ENST00000536218 TDRD12Q587J7 1177 aaKnown RBP15.03■□□□□ -0
LIG1-203ENST00000536218 ZFAND2BQ8WV99 257 aa15.03■□□□□ -0
LIG1-203ENST00000536218 FGD4Q96M96 766 aa15.03■□□□□ -0
LIG1-203ENST00000536218 ZNF317Q96PQ6 595 aaPredicted RBP15.03■□□□□ -0
LIG1-203ENST00000536218 PLEKHG4BQ96PX9 1271 aa15.03■□□□□ -0
LIG1-203ENST00000536218 AP1M1Q9BXS5 423 aa15.03■□□□□ -0
LIG1-203ENST00000536218 ISCUQ9H1K1 167 aa15.03■□□□□ -0
LIG1-203ENST00000536218 MMADHCQ9H3L0 296 aaPredicted RBP15.03■□□□□ -0
LIG1-203ENST00000536218 CNOT10Q9H9A5 744 aaKnown RBP15.03■□□□□ -0
LIG1-203ENST00000536218 INTS9Q9NV88 658 aaKnown RBP15.03■□□□□ -0
LIG1-203ENST00000536218 ZSCAN9O15535 394 aaPredicted RBP15.03■□□□□ -0
LIG1-203ENST00000536218 ABCD1P33897 745 aa15.03■□□□□ -0
LIG1-203ENST00000536218 CASP5P51878 434 aa15.03■□□□□ -0
LIG1-203ENST00000536218 CCDC38Q502W7 563 aa15.03■□□□□ -0
LIG1-203ENST00000536218 HYIQ5T013 277 aa15.03■□□□□ -0
LIG1-203ENST00000536218 IFT74Q96LB3 600 aa15.03■□□□□ -0
LIG1-203ENST00000536218 EIF2AK1Q9BQI3 630 aaKnown RBP15.03■□□□□ -0
LIG1-203ENST00000536218 ATP8A1Q9Y2Q0 1164 aa15.03■□□□□ -0
LIG1-203ENST00000536218 MYH10P35580 1976 aa15.03■□□□□ -0
LIG1-203ENST00000536218 SART1O43290 800 aaKnown RBP15.02■□□□□ -0
LIG1-203ENST00000536218 NPTXRO95502 500 aa15.02■□□□□ -0
LIG1-203ENST00000536218 FGFR1OPO95684 399 aaKnown RBP15.02■□□□□ -0
LIG1-203ENST00000536218 ASNSP08243 561 aa15.02■□□□□ -0
LIG1-203ENST00000536218 RPA1P27694 616 aa15.02■□□□□ -0
LIG1-203ENST00000536218 SLC12A3P55017 1021 aa15.02■□□□□ -0
LIG1-203ENST00000536218 LRRC63Q05C16 580 aa15.02■□□□□ -0
LIG1-203ENST00000536218 KLC1Q07866 573 aa15.02■□□□□ -0
LIG1-203ENST00000536218 LRRC55Q6ZSA7 311 aa15.02■□□□□ -0
LIG1-203ENST00000536218 MAIP1Q8WWC4 291 aa15.02■□□□□ -0
LIG1-203ENST00000536218 FAM20AQ96MK3 541 aa15.02■□□□□ -0
LIG1-203ENST00000536218 DPH5Q9H2P9 285 aa15.02■□□□□ -0
LIG1-203ENST00000536218 ASAP2O43150 1006 aa15.02□□□□□ -0.01
LIG1-203ENST00000536218 GBP1P32455 592 aa15.02□□□□□ -0.01
LIG1-203ENST00000536218 COPS2P61201 443 aa15.02□□□□□ -0.01
LIG1-203ENST00000536218 FKBP3Q00688 224 aaKnown RBP15.02□□□□□ -0.01
LIG1-203ENST00000536218 RNASELQ05823 741 aaKnown RBP15.02□□□□□ -0.01
LIG1-203ENST00000536218 MAN2A1Q16706 1144 aa15.02□□□□□ -0.01
LIG1-203ENST00000536218 MOXD1Q6UVY6 613 aa15.02□□□□□ -0.01
LIG1-203ENST00000536218 RRAGAQ7L523 313 aa15.02□□□□□ -0.01
LIG1-203ENST00000536218 PIGWQ7Z7B1 504 aa15.02□□□□□ -0.01
LIG1-203ENST00000536218 SFR1Q86XK3 245 aa15.02□□□□□ -0.01
LIG1-203ENST00000536218 SCFD1Q8WVM8 642 aa15.02□□□□□ -0.01
LIG1-203ENST00000536218 REEP2Q9BRK0 252 aa15.02□□□□□ -0.01
LIG1-203ENST00000536218 CCPG1Q9ULG6 757 aa15.02□□□□□ -0.01
LIG1-203ENST00000536218 DAPK3O43293 454 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 MAGEA8P43361 318 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 MGARPQ8TDB4 240 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 SLC16A10Q8TF71 515 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 DDX23Q9BUQ8 820 aaKnown RBP15.01□□□□□ -0.01
LIG1-203ENST00000536218 TTYH3Q9C0H2 523 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 NLRC4Q9NPP4 1024 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 MRPL11Q9Y3B7 192 aaKnown RBP15.01□□□□□ -0.01
LIG1-203ENST00000536218 ARP10275 920 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 ALAS1P13196 640 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 SP100P23497 879 aaPredicted RBP15.01□□□□□ -0.01
LIG1-203ENST00000536218 MTA1Q13330 715 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 MKRN4PQ13434 485 aaPredicted RBP15.01□□□□□ -0.01
LIG1-203ENST00000536218 FAM83AQ86UY5 434 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 UHMK1Q8TAS1 419 aaKnown RBP15.01□□□□□ -0.01
LIG1-203ENST00000536218 TAF4BQ92750 862 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 DYDC2Q96IM9 177 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 NSRP1Q9H0G5 558 aaKnown RBP15.01□□□□□ -0.01
LIG1-203ENST00000536218 DNAAF2Q9NVR5 837 aaKnown RBP15.01□□□□□ -0.01
LIG1-203ENST00000536218 BLOC1S6Q9UL45 172 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 ABCB11O95342 1321 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 KCNK3O14649 394 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 MTMR3Q13615 1198 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 GIT2Q14161 759 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 RUSC1Q9BVN2 902 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 RAB17Q9H0T7 212 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 RANBP17Q9H2T7 1088 aaKnown RBP15.01□□□□□ -0.01
LIG1-203ENST00000536218 OCEL1Q9H607 264 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 VAV3Q9UKW4 847 aa15.01□□□□□ -0.01
LIG1-203ENST00000536218 IGLV3-22A0A075B6J6 115 aa15□□□□□ -0.01
LIG1-203ENST00000536218 NFKBIEO00221 500 aa15□□□□□ -0.01
LIG1-203ENST00000536218 TBX3O15119 743 aa15□□□□□ -0.01
LIG1-203ENST00000536218 GAS7O60861 476 aa15□□□□□ -0.01
LIG1-203ENST00000536218 POLD1P28340 1107 aa15□□□□□ -0.01
LIG1-203ENST00000536218 CIITAP33076 1130 aa15□□□□□ -0.01
LIG1-203ENST00000536218 SESN3P58005 492 aa15□□□□□ -0.01
LIG1-203ENST00000536218 COBLL1Q53SF7 1204 aa15□□□□□ -0.01
LIG1-203ENST00000536218 ACBD5Q5T8D3 534 aaPredicted RBP15□□□□□ -0.01
LIG1-203ENST00000536218 MICALL2Q8IY33 904 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms