RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 LAMB1P07942 1786 aa5.02□□□□□ -1.61
YBX3-205ENST00000536107 PRR23AA6NEV1 266 aa5.02□□□□□ -1.61
YBX3-205ENST00000536107 C9orf118A6NHY6 69 aa5.02□□□□□ -1.61
YBX3-205ENST00000536107 SLC5A1P13866 664 aa5.02□□□□□ -1.61
YBX3-205ENST00000536107 MYOGP15173 224 aa5.02□□□□□ -1.61
YBX3-205ENST00000536107 IGHMBP2P38935 993 aaKnown RBP5.02□□□□□ -1.61
YBX3-205ENST00000536107 PABPC4Q13310 644 aaKnown RBP eCLIP5.02□□□□□ -1.61
YBX3-205ENST00000536107 TMEM240Q5SV17 173 aa5.02□□□□□ -1.61
YBX3-205ENST00000536107 PSRC1Q6PGN9 363 aaPredicted RBP5.02□□□□□ -1.61
YBX3-205ENST00000536107 ZNF804AQ7Z570 1209 aa5.02□□□□□ -1.61
YBX3-205ENST00000536107 TMEM199Q8N511 208 aa5.02□□□□□ -1.61
YBX3-205ENST00000536107 RMDN1Q96DB5 314 aa5.02□□□□□ -1.61
YBX3-205ENST00000536107 WWC2-AS2Q96NR7 200 aa5.02□□□□□ -1.61
YBX3-205ENST00000536107 UBE2ZQ9H832 354 aaPredicted RBP5.02□□□□□ -1.61
YBX3-205ENST00000536107 AGTPBP1Q9UPW5 1226 aa5.02□□□□□ -1.61
YBX3-205ENST00000536107 KNSTRNQ9Y448 316 aa5.02□□□□□ -1.61
YBX3-205ENST00000536107 ANKRD36CQ5JPF3 1778 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 ZNF521Q96K83 1311 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 KMT2BQ9UMN6 2715 aaPredicted RBP5.01□□□□□ -1.61
YBX3-205ENST00000536107 CFAP47Q6ZTR5 3102 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 TMEM221A6NGB7 291 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 PATE3B3GLJ2 98 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 NPIPB8E9PQR5 432 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 M0R296 226 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 PDE8AO60658 829 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 TIMP1P01033 207 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 FGBP02675 491 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 C8BP07358 591 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 CSF2RAP15509 400 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 POU3F3P20264 500 aaPredicted RBP5.01□□□□□ -1.61
YBX3-205ENST00000536107 MAPK4P31152 587 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 NOP2P46087 812 aaKnown RBP5.01□□□□□ -1.61
YBX3-205ENST00000536107 FKBP1AP62942 108 aaKnown RBP5.01□□□□□ -1.61
YBX3-205ENST00000536107 LEXMQ3ZCV2 418 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 PRR31Q5SQ13 230 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 MFSD14BQ5SR56 506 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 TREML2Q5T2D2 321 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 WDR78Q5VTH9 848 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 MFSD5Q6N075 450 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 EP400NLQ6ZTU2 488 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 C16orf59Q7L2K0 433 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 OTOP2Q7RTS6 562 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 FAM83AQ86UY5 434 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 TMEM192Q8IY95 271 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 AMER2Q8N7J2 671 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 RGS22Q8NE09 1264 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 GPRC5AQ8NFJ5 357 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 PLBD2Q8NHP8 589 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 NKD2Q969F2 451 aaPredicted RBP5.01□□□□□ -1.61
YBX3-205ENST00000536107 EDC3Q96F86 508 aaKnown RBP5.01□□□□□ -1.61
YBX3-205ENST00000536107 TMEM74Q96NL1 305 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 CEP89Q96ST8 783 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 MPHOSPH8Q99549 860 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 APBA2Q99767 749 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 FSD1Q9BTV5 496 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 ISCA1Q9BUE6 129 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 MUTYHQ9UIF7 546 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 FAM50BQ9Y247 325 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 SLC4A7Q9Y6M7 1214 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 ANKRD11Q6UB99 2663 aaPredicted RBP5.01□□□□□ -1.61
YBX3-205ENST00000536107 COL4A1P02462 1669 aa5.01□□□□□ -1.61
YBX3-205ENST00000536107 LRRC37A2A6NM11 1700 aa5□□□□□ -1.61
YBX3-205ENST00000536107 GAKO14976 1311 aa5□□□□□ -1.61
YBX3-205ENST00000536107 UNC79Q9P2D8 2635 aa5□□□□□ -1.61
YBX3-205ENST00000536107 PROB1E7EW31 1015 aa5□□□□□ -1.61
YBX3-205ENST00000536107 F6X3S4 739 aa5□□□□□ -1.61
YBX3-205ENST00000536107 HTATSF1O43719 755 aaKnown RBP5□□□□□ -1.61
YBX3-205ENST00000536107 GLRX3O76003 335 aaKnown RBP5□□□□□ -1.61
YBX3-205ENST00000536107 CYP2C19P33261 490 aa5□□□□□ -1.61
YBX3-205ENST00000536107 NANOS3P60323 173 aaKnown RBP5□□□□□ -1.61
YBX3-205ENST00000536107 IRX3P78415 501 aaPredicted RBP5□□□□□ -1.61
YBX3-205ENST00000536107 PDE4CQ08493 712 aa5□□□□□ -1.61
YBX3-205ENST00000536107 TCP10Q12799 353 aa5□□□□□ -1.61
YBX3-205ENST00000536107 CNGB1Q14028 1251 aaPredicted RBP5□□□□□ -1.61
YBX3-205ENST00000536107 NOL9Q5SY16 702 aaKnown RBP5□□□□□ -1.61
YBX3-205ENST00000536107 NLRC3Q7RTR2 1065 aa5□□□□□ -1.61
YBX3-205ENST00000536107 LRP10Q7Z4F1 713 aa5□□□□□ -1.61
YBX3-205ENST00000536107 SCYL3Q8IZE3 742 aa5□□□□□ -1.61
YBX3-205ENST00000536107 TDRD7Q8NHU6 1098 aaKnown RBP5□□□□□ -1.61
YBX3-205ENST00000536107 FBXO27Q8NI29 283 aa5□□□□□ -1.61
YBX3-205ENST00000536107 GADD45GIP1Q8TAE8 222 aaPredicted RBP5□□□□□ -1.61
YBX3-205ENST00000536107 KCNG4Q8TDN1 519 aa5□□□□□ -1.61
YBX3-205ENST00000536107 IGDCC4Q8TDY8 1250 aa5□□□□□ -1.61
YBX3-205ENST00000536107 ATG4CQ96DT6 458 aa5□□□□□ -1.61
YBX3-205ENST00000536107 PTCHD1Q96NR3 888 aa5□□□□□ -1.61
YBX3-205ENST00000536107 ZNF112Q9UJU3 913 aa5□□□□□ -1.61
YBX3-205ENST00000536107 AFG3L2Q9Y4W6 797 aa5□□□□□ -1.61
YBX3-205ENST00000536107 PCDHB14Q9Y5E9 798 aa5□□□□□ -1.61
YBX3-205ENST00000536107 LRRFIP2Q9Y608 721 aaKnown RBP5□□□□□ -1.61
YBX3-205ENST00000536107 OTOFQ9HC10 1997 aa5□□□□□ -1.61
YBX3-205ENST00000536107 UTYO14607 1347 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 NCOR2Q9Y618 2525 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 CHD9Q3L8U1 2897 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 CHD6Q8TD26 2715 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 LAMB2P55268 1798 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 H3BQ06 376 aaPredicted RBP4.99□□□□□ -1.61
YBX3-205ENST00000536107 CA3P07451 260 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 ATP2A2P16615 1042 aaKnown RBP4.99□□□□□ -1.61
YBX3-205ENST00000536107 DPTQ07507 201 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 GRB10Q13322 594 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms