RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 C2orf40Q9H1Z8 148 aa14□□□□□ -0.17
DDB1-207ENST00000535967 AGO3Q9H9G7 860 aaKnown RBP14□□□□□ -0.17
DDB1-207ENST00000535967 CDHR5Q9HBB8 845 aa14□□□□□ -0.17
DDB1-207ENST00000535967 IFT122Q9HBG6 1241 aa14□□□□□ -0.17
DDB1-207ENST00000535967 GDPD2Q9HCC8 539 aa14□□□□□ -0.17
DDB1-207ENST00000535967 GPRC5CQ9NQ84 441 aa14□□□□□ -0.17
DDB1-207ENST00000535967 PADI3Q9ULW8 664 aa14□□□□□ -0.17
DDB1-207ENST00000535967 NOC2LQ9Y3T9 749 aaKnown RBP14□□□□□ -0.17
DDB1-207ENST00000535967 FNDC1Q4ZHG4 1894 aaPredicted RBP14□□□□□ -0.17
DDB1-207ENST00000535967 PHLPP2Q6ZVD8 1323 aa14□□□□□ -0.17
DDB1-207ENST00000535967 KIAA1671Q9BY89 1806 aa14□□□□□ -0.17
DDB1-207ENST00000535967 PFKFB1P16118 471 aa13.99□□□□□ -0.17
DDB1-207ENST00000535967 PTENP60484 403 aa13.99□□□□□ -0.17
DDB1-207ENST00000535967 CDCA2Q69YH5 1023 aaPredicted RBP13.99□□□□□ -0.17
DDB1-207ENST00000535967 MAEAQ7L5Y9 396 aa13.99□□□□□ -0.17
DDB1-207ENST00000535967 MYOCDQ8IZQ8 938 aa13.99□□□□□ -0.17
DDB1-207ENST00000535967 DAW1Q8N136 415 aa13.99□□□□□ -0.17
DDB1-207ENST00000535967 GJD3Q8N144 294 aa13.99□□□□□ -0.17
DDB1-207ENST00000535967 PDILTQ8N807 584 aa13.99□□□□□ -0.17
DDB1-207ENST00000535967 MRPS27Q92552 414 aaKnown RBP13.99□□□□□ -0.17
DDB1-207ENST00000535967 LRRC27Q9C0I9 530 aa13.99□□□□□ -0.17
DDB1-207ENST00000535967 TNMDQ9H2S6 317 aa13.99□□□□□ -0.17
DDB1-207ENST00000535967 USP25Q9UHP3 1055 aa13.99□□□□□ -0.17
DDB1-207ENST00000535967 KCNG1Q9UIX4 513 aa13.99□□□□□ -0.17
DDB1-207ENST00000535967 KCNH3Q9ULD8 1083 aa13.99□□□□□ -0.17
DDB1-207ENST00000535967 HPSEQ9Y251 543 aa13.99□□□□□ -0.17
DDB1-207ENST00000535967 LRRIQ4A6NIV6 560 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 H3BQ06 376 aaPredicted RBP13.98□□□□□ -0.17
DDB1-207ENST00000535967 KRT18P05783 430 aaKnown RBP13.98□□□□□ -0.17
DDB1-207ENST00000535967 SRGAP2CP0DJJ0 459 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 HTRA4P83105 476 aaPredicted RBP13.98□□□□□ -0.17
DDB1-207ENST00000535967 DMP1Q13316 513 aaPredicted RBP13.98□□□□□ -0.17
DDB1-207ENST00000535967 DHX8Q14562 1220 aaKnown RBP13.98□□□□□ -0.17
DDB1-207ENST00000535967 ARSHQ5FYA8 562 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 PTCRAQ6ISU1 281 aaPredicted RBP13.98□□□□□ -0.17
DDB1-207ENST00000535967 ZBTB8OSQ8IWT0 167 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 TMEM87AQ8NBN3 555 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 DHX58Q96C10 678 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 ZNF668Q96K58 619 aaPredicted RBP13.98□□□□□ -0.17
DDB1-207ENST00000535967 REEP2Q9BRK0 252 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 LARSQ9P2J5 1176 aaKnown RBP13.98□□□□□ -0.17
DDB1-207ENST00000535967 ST3GAL5Q9UNP4 418 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 GOLGA6L4A6NEF3 574 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 POLR2DO15514 142 aaKnown RBP13.98□□□□□ -0.17
DDB1-207ENST00000535967 TBCAO75347 108 aaKnown RBP13.98□□□□□ -0.17
DDB1-207ENST00000535967 SCP2P22307 547 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 ZNF131P52739 623 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 EFNA5P52803 228 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 AMPD3Q01432 767 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 NFX1Q12986 1120 aaKnown RBP13.98□□□□□ -0.17
DDB1-207ENST00000535967 ZNF454Q8N9F8 522 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 DEPTORQ8TB45 409 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 BSNDQ8WZ55 320 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 C1orf112Q9NSG2 853 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 KBTBD4Q9NVX7 518 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 INSL6Q9Y581 213 aa13.98□□□□□ -0.17
DDB1-207ENST00000535967 TDRD15B5MCY1 1934 aaKnown RBP13.97□□□□□ -0.17
DDB1-207ENST00000535967 A0A1B0GVL5 298 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 H0YCG3 227 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 ERLIN2O94905 339 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 AMHP03971 560 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 PLS3P13797 630 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 AXLP30530 894 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 SSTR3P32745 418 aaPredicted RBP13.97□□□□□ -0.17
DDB1-207ENST00000535967 MBTD1Q05BQ5 628 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 GIT2Q14161 759 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 EPC2Q52LR7 807 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 VARS2Q5ST30 1063 aaKnown RBP13.97□□□□□ -0.17
DDB1-207ENST00000535967 CLEC17AQ6ZS10 378 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 CATSPER4Q7RTX7 472 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 CEP57L1Q8IYX8 460 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 FSIP1Q8NA03 581 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 SPIRE2Q8WWL2 714 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 MRPL38Q96DV4 380 aaKnown RBP13.97□□□□□ -0.17
DDB1-207ENST00000535967 PRIMPOLQ96LW4 560 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 PANK2Q9BZ23 570 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 TMX1Q9H3N1 280 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 PARVGQ9HBI0 331 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 CHST12Q9NRB3 414 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 AGPAT5Q9NUQ2 364 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 PRMT7Q9NVM4 692 aaPredicted RBP13.97□□□□□ -0.17
DDB1-207ENST00000535967 PCDHGA10Q9Y5H3 936 aa13.97□□□□□ -0.17
DDB1-207ENST00000535967 PDCD11Q14690 1871 aaKnown RBP13.96□□□□□ -0.17
DDB1-207ENST00000535967 TECTAO75443 2155 aa13.96□□□□□ -0.17
DDB1-207ENST00000535967 ZDBF2Q9HCK1 2354 aa13.96□□□□□ -0.17
DDB1-207ENST00000535967 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.96□□□□□ -0.18
DDB1-207ENST00000535967 PRR33A8MZF0 331 aa13.96□□□□□ -0.18
DDB1-207ENST00000535967 INO80B-WBP1J3KQ70 363 aa13.96□□□□□ -0.18
DDB1-207ENST00000535967 FAM13AO94988 1023 aa13.96□□□□□ -0.18
DDB1-207ENST00000535967 SLFN14P0C7P3 912 aa13.96□□□□□ -0.18
DDB1-207ENST00000535967 GAP43P17677 238 aa13.96□□□□□ -0.18
DDB1-207ENST00000535967 ABCD1P33897 745 aa13.96□□□□□ -0.18
DDB1-207ENST00000535967 SYKP43405 635 aa13.96□□□□□ -0.18
DDB1-207ENST00000535967 NPTX2P47972 431 aa13.96□□□□□ -0.18
DDB1-207ENST00000535967 SMTNP53814 917 aa13.96□□□□□ -0.18
DDB1-207ENST00000535967 PEX3P56589 373 aa13.96□□□□□ -0.18
DDB1-207ENST00000535967 RAD51AP2Q09MP3 1159 aa13.96□□□□□ -0.18
DDB1-207ENST00000535967 DSC3Q14574 896 aa13.96□□□□□ -0.18
DDB1-207ENST00000535967 FAM187BQ17R55 369 aa13.96□□□□□ -0.18
DDB1-207ENST00000535967 CNNM4Q6P4Q7 775 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms