RNA–Protein interactions for RNA: ENST00000535622.5

DEPDC5-222, Transcript of DEP domain containing 5, human

TSL 2 BASIC

Gene DEPDC5, Length 5,155 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DEPDC5-222	ENST00000535622	PDCD2	Q16342	344 aa	Predicted RBP	11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	PPP6R3	Q5H9R7	873 aa	Predicted RBP	11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	TRIM67	Q6ZTA4	783 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ZC3H18	Q86VM9	953 aa	Known RBP	11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	PASD1	Q8IV76	773 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	SCG3	Q8WXD2	468 aa	Known RBP	11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	PPCS	Q9HAB8	311 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ETNK1	Q9HBU6	452 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	HOXC10	Q9NYD6	342 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	CHGB	P05060	677 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	KRT10	P13645	584 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	SMARCA1	P28370	1054 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	KRT17	Q04695	432 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	NAB2	Q15742	525 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	INO80	Q9ULG1	1556 aa	Predicted RBP	11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ZNF185	O15231	689 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	CCDC22	O60826	627 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	GYPC	P04921	128 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	SDC4	P31431	198 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	PAPOLA	P51003	745 aa	Known RBP	11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ZNF473	Q8WTR7	871 aa	Known RBP	11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	L2HGDH	Q9H9P8	463 aa		11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	SMG5	Q9UPR3	1016 aa	Known RBP	11.73	□□□□□ -0.53
DEPDC5-222	ENST00000535622	COPS2	P61201	443 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	AP2B1	P63010	937 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	KIF22	Q14807	665 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ZBED8	Q8IZ13	594 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	GIPC2	Q8TF65	315 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	RNF139	Q8WU17	664 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	SKA2	Q8WVK7	121 aa	Predicted RBP	11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	SAAL1	Q96ER3	474 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ZNF302	Q9NR11	478 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	APEX2	Q9UBZ4	518 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ARL2BP	Q9Y2Y0	163 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	FAM205C	A6NFA0	338 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	APOE	P02649	317 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	TRIM49	P0CI25	452 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	TRIM49C	P0CI26	452 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	RFX5	P48382	616 aa	Predicted RBP	11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	SLC27A3	Q5K4L6	730 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	C1orf146	Q5VVC0	180 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	RBM43	Q6ZSC3	357 aa	Known RBP	11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	HAUS6	Q7Z4H7	955 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	TRIML2	Q8N7C3	387 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	HERC5	Q9UII4	1024 aa	Known RBP	11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	FIS1	Q9Y3D6	152 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ITIH2	P19823	946 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	PPARG	P37231	505 aa	Predicted RBP	11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	IREB2	P48200	963 aa	Known RBP	11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ROR1	Q01973	937 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	NCAPH	Q15003	741 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ZNF394	Q53GI3	561 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	SPATA21	Q7Z572	469 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	PSPC1	Q8WXF1	523 aa	Known RBP	11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	THOC1	Q96FV9	657 aa	Known RBP	11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	FOXP3	Q9BZS1	431 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	AGPAT5	Q9NUQ2	364 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	NDE1	Q9NXR1	346 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	TTC7A	Q9ULT0	858 aa	Predicted RBP	11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	AKR1B1	P15121	316 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	UCHL3	P15374	230 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	PSMC1	P62191	440 aa	Known RBP	11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ZNF568	Q3ZCX4	644 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ARHGAP27	Q6ZUM4	889 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ABI1	Q8IZP0	508 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	PIP4K2C	Q8TBX8	421 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	CYTH2	Q99418	400 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622	SLC9A2	Q9UBY0	812 aa		11.72	□□□□□ -0.53
DEPDC5-222	ENST00000535622		H0Y3Z8	333 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ZFX	P17010	805 aa	Predicted RBP	11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	CACNB3	P54284	484 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	OCRL	Q01968	901 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ZBTB17	Q13105	803 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	C4orf50	Q6ZRC1	276 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	KRT27	Q7Z3Y8	459 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	PRPF38A	Q8NAV1	312 aa	Known RBP	11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ERGIC2	Q96RQ1	377 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	CCT8L2	Q96SF2	557 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	MRPL4	Q9BYD3	311 aa	Known RBP	11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	MTMR4	Q9NYA4	1195 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ZNF543	Q08ER8	600 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	SF3B3	Q15393	1217 aa	Known RBP	11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	CEP55	Q53EZ4	464 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	PPM1N	Q8N819	430 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	TTLL6	Q8N841	843 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	SLC35G2	Q8TBE7	412 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	C1orf54	Q8WWF1	131 aa		11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	RAVER2	Q9HCJ3	691 aa	Known RBP	11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	G3BP2	Q9UN86	482 aa	Known RBP	11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.71	□□□□□ -0.53
DEPDC5-222	ENST00000535622	ZC3H13	Q5T200	1668 aa	Known RBP	11.71	□□□□□ -0.54
DEPDC5-222	ENST00000535622	ECE2	O60344	883 aa		11.71	□□□□□ -0.54
DEPDC5-222	ENST00000535622	CIITA	P33076	1130 aa		11.71	□□□□□ -0.54
DEPDC5-222	ENST00000535622	GALC	P54803	685 aa		11.71	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms