RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.03■□□□□ 0.322e-6■■■■□ 25.8
MCF2L-232ENST00000535094 ZNF148Q9UQR1 794 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 EYA4O95677 639 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 RARAP10276 462 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 CA4P22748 312 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 TARSP26639 723 aaKnown RBP17.03■□□□□ 0.32
MCF2L-232ENST00000535094 XRCC4Q13426 336 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 MEX3CQ5U5Q3 659 aaKnown RBP17.03■□□□□ 0.32
MCF2L-232ENST00000535094 ERICH1Q86X53 443 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 ZFPM1Q8IX07 1006 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 ZSWIM1Q9BR11 485 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 AGPAT3Q9NRZ7 376 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 LARSQ9P2J5 1176 aaKnown RBP17.03■□□□□ 0.32
MCF2L-232ENST00000535094 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-232ENST00000535094 EXOC1LA0A1B0GW35 172 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 PIAS1O75925 651 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 GBP1P32455 592 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 CETN2P41208 172 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 RNASELQ05823 741 aaKnown RBP17.03■□□□□ 0.32
MCF2L-232ENST00000535094 AUHQ13825 339 aaKnown RBP17.03■□□□□ 0.32
MCF2L-232ENST00000535094 FAM102BQ5T8I3 360 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 TEX2Q8IWB9 1127 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 PRKCIP41743 596 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 COPS2P61201 443 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 SARNPP82979 210 aaKnown RBP17.02■□□□□ 0.32
MCF2L-232ENST00000535094 BFSP1Q12934 665 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 LMBRD2Q68DH5 695 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-232ENST00000535094 PHLDB3Q6NSJ2 640 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 TTC27Q6P3X3 843 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 EXOC3L1Q86VI1 746 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 SUPT20HQ8NEM7 779 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 ATP8B4Q8TF62 1192 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 ARL2BPQ9Y2Y0 163 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 CFAP73A6NFT4 308 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 GH2P01242 217 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 KRT16P08779 473 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 VAMP7P51809 220 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 ITGA8P53708 1063 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 IL9RQ01113 521 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 ARHGEF18Q6ZSZ5 1173 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 EPM2AIP1Q7L775 607 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-232ENST00000535094 SLC13A5Q86YT5 568 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-232ENST00000535094 ATP6V0A4Q9HBG4 840 aa17.02■□□□□ 0.32
MCF2L-232ENST00000535094 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.02■□□□□ 0.32
MCF2L-232ENST00000535094 PHRF1Q9P1Y6 1649 aaKnown RBP17.02■□□□□ 0.31
MCF2L-232ENST00000535094 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.02■□□□□ 0.31
MCF2L-232ENST00000535094 PI4K2BG5E9Z4 385 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 TGFB1I1O43294 461 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 SNX3O60493 162 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 SPATA31C1P0DKV0 1188 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 RAD23BP54727 409 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 CNGA2Q16280 664 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 MUM1Q2TAK8 710 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 SLC10A5Q5PT55 438 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 ARHGEF19Q8IW93 802 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 C3orf20Q8ND61 904 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 CBWD1Q9BRT8 395 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 KIF9Q9HAQ2 790 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 POLLQ9UGP5 575 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 PCDHA2Q9Y5H9 948 aa17.02■□□□□ 0.31
MCF2L-232ENST00000535094 CES2O00748 559 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 DDX3YO15523 660 aaKnown RBP17.01■□□□□ 0.31
MCF2L-232ENST00000535094 ATP2A2P16615 1042 aaKnown RBP17.01■□□□□ 0.31
MCF2L-232ENST00000535094 MSH2P43246 934 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 PEX3P56589 373 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 ABCB5Q2M3G0 1257 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 SYDE2Q5VT97 1194 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 MIER3Q7Z3K6 550 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 SLC47A2Q86VL8 602 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 SAYSD1Q9NPB0 183 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 GGA2Q9UJY4 613 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 ATXN2Q99700 1313 aaKnown RBP17.01■□□□□ 0.31
MCF2L-232ENST00000535094 USP54Q70EL1 1684 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 SLC16A4O15374 487 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 DNAJC8O75937 253 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-232ENST00000535094 MYCLP12524 364 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-232ENST00000535094 HSPA6P17066 643 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 LRRC8CQ8TDW0 803 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 PI4K2AQ9BTU6 479 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 HAO1Q9UJM8 370 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 GOLGA8RI6L899 631 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 CLGNO14967 610 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 EDIL3O43854 480 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 SMARCA1P28370 1054 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 HOXD13P35453 343 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 MXRA7P84157 204 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 DHX38Q92620 1227 aaKnown RBP17.01■□□□□ 0.31
MCF2L-232ENST00000535094 SIX2Q9NPC8 291 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 DIS3Q9Y2L1 958 aaKnown RBP17.01■□□□□ 0.31
MCF2L-232ENST00000535094 C15orf41Q9Y2V0 281 aa17.01■□□□□ 0.31
MCF2L-232ENST00000535094 PPIP5K2O43314 1243 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 BMP3P12645 472 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 POLD1P28340 1107 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 MMP13P45452 471 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 PPP1R18Q6NYC8 613 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 COL23A1Q86Y22 540 aaPredicted RBP17■□□□□ 0.31
MCF2L-232ENST00000535094 CPA5Q8WXQ8 436 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 PGM2Q96G03 612 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 MYH7BA7E2Y1 1941 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 A0A0A6YYK5 440 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms