RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 THEGQ9P2T0 379 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 LZTS1Q9Y250 596 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 INPP5FQ9Y2H2 1132 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 GIT1Q9Y2X7 761 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 INPPL1O15357 1258 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 TBCAO75347 108 aaKnown RBP17.43■□□□□ 0.38
TSKU-204ENST00000533752 FGF18O76093 207 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 NPTXRO95502 500 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 LIG1P18858 919 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 DDIT3P35638 169 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 ALDH7A1P49419 539 aaKnown RBP17.43■□□□□ 0.38
TSKU-204ENST00000533752 RAD51AP2Q09MP3 1159 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 PKP1Q13835 747 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 MCM6Q14566 821 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 LONRF3Q496Y0 759 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 KCNT2Q6UVM3 1135 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 REEP2Q9BRK0 252 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 NTPCRQ9BSD7 190 aaKnown RBP17.43■□□□□ 0.38
TSKU-204ENST00000533752 MRPL4Q9BYD3 311 aaKnown RBP17.43■□□□□ 0.38
TSKU-204ENST00000533752 PDZD7Q9H5P4 517 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 PARVGQ9HBI0 331 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 POLD4Q9HCU8 107 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 ALG13Q9NP73 1137 aaKnown RBP17.43■□□□□ 0.38
TSKU-204ENST00000533752 TBC1D13Q9NVG8 400 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 TFIP11Q9UBB9 837 aaKnown RBP17.43■□□□□ 0.38
TSKU-204ENST00000533752 HCSTQ9UBK5 93 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 COG5Q9UP83 839 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 ATP6V1DQ9Y5K8 247 aa17.43■□□□□ 0.38
TSKU-204ENST00000533752 EYSQ5T1H1 3165 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 MEIS3P2A8K0S8 358 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 CUTAO60888 179 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 ZC3H11AO75152 810 aaKnown RBP eCLIP17.42■□□□□ 0.38
TSKU-204ENST00000533752 FAM13AO94988 1023 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 BRD1O95696 1058 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 ABCD1P33897 745 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 PLCB3Q01970 1234 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 KRT17Q04695 432 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 STRN3Q13033 797 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 DHX8Q14562 1220 aaKnown RBP17.42■□□□□ 0.38
TSKU-204ENST00000533752 ARSHQ5FYA8 562 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 ATF7IP2Q5U623 682 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 PDE12Q6L8Q7 609 aaKnown RBP17.42■□□□□ 0.38
TSKU-204ENST00000533752 USP49Q70CQ1 688 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 SPPL3Q8TCT6 385 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 LRRC15Q8TF66 581 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 NXF3Q9H4D5 531 aaKnown RBP17.42■□□□□ 0.38
TSKU-204ENST00000533752 SPG21Q9NZD8 308 aa17.42■□□□□ 0.38
TSKU-204ENST00000533752 PUF60Q9UHX1 559 aaKnown RBP17.42■□□□□ 0.38
TSKU-204ENST00000533752 SLC16A4O15374 487 aa17.41■□□□□ 0.38
TSKU-204ENST00000533752 NCK2O43639 380 aa17.41■□□□□ 0.38
TSKU-204ENST00000533752 STAT6P42226 847 aa17.41■□□□□ 0.38
TSKU-204ENST00000533752 ZNF131P52739 623 aa17.41■□□□□ 0.38
TSKU-204ENST00000533752 FOXD4L6Q3SYB3 417 aaPredicted RBP17.41■□□□□ 0.38
TSKU-204ENST00000533752 FOXD4L3Q6VB84 417 aaPredicted RBP17.41■□□□□ 0.38
TSKU-204ENST00000533752 SV2BQ7L1I2 683 aa17.41■□□□□ 0.38
TSKU-204ENST00000533752 SLC39A11Q8N1S5 342 aa17.41■□□□□ 0.38
TSKU-204ENST00000533752 POF1BQ8WVV4 589 aa17.41■□□□□ 0.38
TSKU-204ENST00000533752 ATXN2LQ8WWM7 1075 aaKnown RBP17.41■□□□□ 0.38
TSKU-204ENST00000533752 KCNN1Q92952 543 aa17.41■□□□□ 0.38
TSKU-204ENST00000533752 FAM193BQ96PV7 902 aaPredicted RBP17.41■□□□□ 0.38
TSKU-204ENST00000533752 TMEM175Q9BSA9 504 aa17.41■□□□□ 0.38
TSKU-204ENST00000533752 TLR9Q9NR96 1032 aa17.41■□□□□ 0.38
TSKU-204ENST00000533752 STK39Q9UEW8 545 aa17.41■□□□□ 0.38
TSKU-204ENST00000533752 TNFSF13BQ9Y275 285 aa17.41■□□□□ 0.38
TSKU-204ENST00000533752 HES2Q9Y543 173 aa17.41■□□□□ 0.38
TSKU-204ENST00000533752 NPHP3-ACAD11A0A0J9YXS1 232 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 FSD2A1L4K1 749 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 ARL5CA6NH57 179 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 SFI1A8K8P3 1242 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 MLH1P40692 756 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 ME1P48163 572 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 BCAR1P56945 870 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 AAK1Q2M2I8 961 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 CDR2LQ86X02 465 aaPredicted RBP17.4■□□□□ 0.38
TSKU-204ENST00000533752 TMEM161BQ8NDZ6 487 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 MRPS27Q92552 414 aaKnown RBP17.4■□□□□ 0.38
TSKU-204ENST00000533752 HLA-CQ95604 372 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 TMEM169Q96HH4 297 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 RPS6KC1Q96S38 1066 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 GAD1Q99259 594 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 APOL6Q9BWW8 343 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 CUEDC2Q9H467 287 aa17.4■□□□□ 0.38
TSKU-204ENST00000533752 PRUNE2Q8WUY3 3088 aa17.39■□□□□ 0.38
TSKU-204ENST00000533752 EDN1P05305 212 aa17.39■□□□□ 0.37
TSKU-204ENST00000533752 MAPTP10636 758 aaKnown RBP17.39■□□□□ 0.37
TSKU-204ENST00000533752 NCKAP1LP55160 1127 aa17.39■□□□□ 0.37
TSKU-204ENST00000533752 KRT85P78386 507 aa17.39■□□□□ 0.37
TSKU-204ENST00000533752 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
TSKU-204ENST00000533752 DNM1Q05193 864 aaKnown RBP17.39■□□□□ 0.37
TSKU-204ENST00000533752 GIT2Q14161 759 aa17.39■□□□□ 0.37
TSKU-204ENST00000533752 BMS1Q14692 1282 aaKnown RBP17.39■□□□□ 0.37
TSKU-204ENST00000533752 ZNF568Q3ZCX4 644 aa17.39■□□□□ 0.37
TSKU-204ENST00000533752 TCEAL5Q5H9L2 206 aa17.39■□□□□ 0.37
TSKU-204ENST00000533752 NT5DC1Q5TFE4 455 aa17.39■□□□□ 0.37
TSKU-204ENST00000533752 MYCT1Q8N699 235 aa17.39■□□□□ 0.37
TSKU-204ENST00000533752 ACO2Q99798 780 aaKnown RBP17.39■□□□□ 0.37
TSKU-204ENST00000533752 LRRC27Q9C0I9 530 aa17.39■□□□□ 0.37
TSKU-204ENST00000533752 GBP3Q9H0R5 595 aa17.39■□□□□ 0.37
TSKU-204ENST00000533752 RNF39Q9H2S5 420 aa17.39■□□□□ 0.37
TSKU-204ENST00000533752 NRDE2Q9H7Z3 1164 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms