RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 TAL1P17542 331 aaPredicted RBP8.72□□□□□ -1.01
CASP4-212ENST00000533730 ALDH5A1P51649 535 aaPredicted RBP8.72□□□□□ -1.01
CASP4-212ENST00000533730 CCT2P78371 535 aaKnown RBP8.72□□□□□ -1.01
CASP4-212ENST00000533730 PFKFB3Q16875 520 aaPredicted RBP8.72□□□□□ -1.01
CASP4-212ENST00000533730 TM4SF20Q53R12 229 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 MCTP2Q6DN12 878 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 GDF6Q6KF10 455 aaPredicted RBP8.72□□□□□ -1.01
CASP4-212ENST00000533730 HEATR3Q7Z4Q2 680 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 DMRTC2Q8IXT2 367 aaPredicted RBP8.72□□□□□ -1.01
CASP4-212ENST00000533730 IL22RA1Q8N6P7 574 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 SYTL5Q8TDW5 730 aaPredicted RBP8.72□□□□□ -1.01
CASP4-212ENST00000533730 MORC4Q8TE76 937 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 U2AF1L4Q8WU68 220 aaKnown RBP8.72□□□□□ -1.01
CASP4-212ENST00000533730 TMEM40Q8WWA1 233 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 SGSM3Q96HU1 749 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 ZSCAN31Q96LW9 406 aaPredicted RBP8.72□□□□□ -1.01
CASP4-212ENST00000533730 FGD4Q96M96 766 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 TBC1D32Q96NH3 1257 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 IWS1Q96ST2 819 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 SPATA9Q9BWV2 254 aa8.72□□□□□ -1.01
CASP4-212ENST00000533730 NOP53Q9NZM5 478 aaKnown RBP8.72□□□□□ -1.01
CASP4-212ENST00000533730 PEX14O75381 377 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 HTR3BO95264 441 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 SNAI1O95863 264 aaPredicted RBP8.71□□□□□ -1.02
CASP4-212ENST00000533730 MYCLP1P12525 358 aaPredicted RBP8.71□□□□□ -1.02
CASP4-212ENST00000533730 SCG2P13521 617 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 AKR1A1P14550 325 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 EDNRBP24530 442 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 CCND3P30281 292 aaPredicted RBP8.71□□□□□ -1.02
CASP4-212ENST00000533730 NAPAP54920 295 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 STK3Q13188 491 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 ACVR2BQ13705 512 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 NTRK3Q16288 839 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 BRDTQ58F21 947 aaPredicted RBP8.71□□□□□ -1.02
CASP4-212ENST00000533730 ARHGEF16Q5VV41 709 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 HGSNATQ68CP4 663 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 VHLLQ6RSH7 139 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 PDZD3Q86UT5 571 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 RAVER1Q8IY67 606 aaKnown RBP8.71□□□□□ -1.02
CASP4-212ENST00000533730 CCDC148Q8NFR7 591 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 SMARCC2Q8TAQ2 1214 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 CHAC2Q8WUX2 184 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 NINJ1Q92982 152 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 DEFB118Q96PH6 123 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 RMDN3Q96TC7 470 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 KIF2CQ99661 725 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 PSTPIP2Q9H939 334 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 NCOA5Q9HCD5 579 aaKnown RBP8.71□□□□□ -1.02
CASP4-212ENST00000533730 VTA1Q9NP79 307 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 SH3GLB2Q9NR46 395 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 SH2B1Q9NRF2 756 aaPredicted RBP8.71□□□□□ -1.02
CASP4-212ENST00000533730 BARHL2Q9NY43 387 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 DDX20Q9UHI6 824 aaKnown RBP8.71□□□□□ -1.02
CASP4-212ENST00000533730 FAM184BQ9ULE4 1060 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 TPCN1Q9ULQ1 816 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 LIMCH1Q9UPQ0 1083 aa8.71□□□□□ -1.02
CASP4-212ENST00000533730 A0A0A0MRY4 1105 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 hCG_1642624A0A1W2PR95 340 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 ESYT2A0FGR8 921 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 STAM2O75886 525 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 DEXIO95424 95 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 FOSP01100 380 aaPredicted RBP8.7□□□□□ -1.02
CASP4-212ENST00000533730 TFRCP02786 760 aaKnown RBP8.7□□□□□ -1.02
CASP4-212ENST00000533730 ZNF865P0CJ78 1059 aaPredicted RBP8.7□□□□□ -1.02
CASP4-212ENST00000533730 RARBP10826 455 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 ESRRAP11474 423 aaPredicted RBP8.7□□□□□ -1.02
CASP4-212ENST00000533730 SELPP16109 830 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 XBP1P17861 261 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 GNA11P29992 359 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 MCM2P49736 904 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 SOX10P56693 466 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 STXBP2Q15833 593 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 WWC2Q6AWC2 1192 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 IQSEC1Q6DN90 963 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 XRRA1Q6P2D8 792 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 ALYREFQ86V81 257 aaKnown RBP8.7□□□□□ -1.02
CASP4-212ENST00000533730 WFDC8Q8IUA0 241 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 ARRDC4Q8NCT1 418 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 TRPV1Q8NER1 839 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 BICD2Q8TD16 824 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 WASF1Q92558 559 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 TBC1D5Q92609 795 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 TAAR1Q96RJ0 339 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 SLC26A6Q9BXS9 759 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 LACRTQ9GZZ8 138 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 C6orf50Q9HD87 102 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 RIC8AQ9NPQ8 531 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 PXMP2Q9NR77 195 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 ZHX1Q9UKY1 873 aaPredicted RBP8.7□□□□□ -1.02
CASP4-212ENST00000533730 OGDHLQ9ULD0 1010 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 CORINQ9Y5Q5 1042 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 BAZ2BQ9UIF8 2168 aaKnown RBP8.7□□□□□ -1.02
CASP4-212ENST00000533730 STK36Q9NRP7 1315 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 SMCHD1A6NHR9 2005 aa8.7□□□□□ -1.02
CASP4-212ENST00000533730 SPDYE3A6NKU9 549 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 STXBP3O00186 592 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 MEIS2O14770 477 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 TM4SF5O14894 197 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 DUSP11O75319 330 aaKnown RBP8.69□□□□□ -1.02
CASP4-212ENST00000533730 EIF3JO75822 258 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms