RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 PRG3Q9Y2Y8 225 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-225ENST00000533704 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-225ENST00000533704 FSD2A1L4K1 749 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 FAM86C2PA6NEL3 165 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 DDHD2O94830 711 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 AKAP5P24588 427 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 CDC25AP30304 524 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 SCNN1GP51170 649 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 POU5F1BQ06416 359 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 AMHR2Q16671 573 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 LARP1BQ659C4 914 aaKnown RBP11.55□□□□□ -0.56
CAPN1-225ENST00000533704 DTHD1Q6ZMT9 781 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 HACE1Q8IYU2 909 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 ZFP42Q96MM3 310 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 NFKBIZQ9BYH8 718 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 NXF3Q9H4D5 531 aaKnown RBP11.55□□□□□ -0.56
CAPN1-225ENST00000533704 UBN1Q9NPG3 1134 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.55□□□□□ -0.56
CAPN1-225ENST00000533704 PRMT7Q9NVM4 692 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-225ENST00000533704 KLK14Q9P0G3 267 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 KANSL3Q9P2N6 904 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 PRKAG3Q9UGI9 489 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 PARP2Q9UGN5 583 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 FAN1Q9Y2M0 1017 aa11.55□□□□□ -0.56
CAPN1-225ENST00000533704 USP15Q9Y4E8 981 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-225ENST00000533704 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-225ENST00000533704 CITO14578 2027 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 CARNS1A5YM72 827 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 C2orf71A6NGG8 1288 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 ARL5CA6NH57 179 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 E9PMD0 336 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 LAD1O00515 517 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 ALDH2P05091 517 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 PRKCBP05771 671 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 COL9A1P20849 921 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 MUTP22033 750 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 OR1G1P47890 313 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 COASYQ13057 564 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 PDIA5Q14554 519 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 PPP2R5AQ15172 486 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 IL17AQ16552 155 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 MAPK6Q16659 721 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 RILPL1Q5EBL4 403 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 ANKRD54Q6NXT1 300 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 SLC27A1Q6PCB7 646 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 DDX53Q86TM3 631 aaKnown RBP11.54□□□□□ -0.56
CAPN1-225ENST00000533704 MRPL43Q8N983 215 aaKnown RBP11.54□□□□□ -0.56
CAPN1-225ENST00000533704 IGSF22Q8N9C0 903 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 SMRP1Q8NCR6 262 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 IFT74Q96LB3 600 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 PLIN2Q99541 437 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 POP1Q99575 1024 aaKnown RBP11.54□□□□□ -0.56
CAPN1-225ENST00000533704 TMEM175Q9BSA9 504 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 KIFC3Q9BVG8 833 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 ZBP1Q9H171 429 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 C2orf40Q9H1Z8 148 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 RAPGEFL1Q9UHV5 662 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 DNM3Q9UQ16 869 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 USP20Q9Y2K6 914 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 PLXNA3P51805 1871 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 MYO10Q9HD67 2058 aa11.54□□□□□ -0.56
CAPN1-225ENST00000533704 VPS37CA5D8V6 355 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-225ENST00000533704 VWA3AA6NCI4 1184 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 SPDYE4A6NLX3 237 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 TTLL13PA6NNM8 815 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 CCDC169A6NNP5 214 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 NRP1O14786 923 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 N4BP3O15049 544 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 CLASP2O75122 1294 aaKnown RBP11.53□□□□□ -0.56
CAPN1-225ENST00000533704 EYA4O95677 639 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 CTSAP10619 480 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 PRPHP41219 470 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 NAMPTP43490 491 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 PRPF4BQ13523 1007 aaKnown RBP11.53□□□□□ -0.56
CAPN1-225ENST00000533704 TMEM31Q5JXX7 168 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 CDCA2Q69YH5 1023 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-225ENST00000533704 CASP10Q92851 521 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 CDK5RAP3Q96JB5 506 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 RPGRIP1Q96KN7 1286 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 RPS6KC1Q96S38 1066 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 VN1R3Q9BXE9 311 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 FZD8Q9H461 694 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 MIOSQ9NXC5 875 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 HCFC2Q9Y5Z7 792 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 C5orf42Q9H799 3197 aa11.53□□□□□ -0.56
CAPN1-225ENST00000533704 C2orf16Q68DN1 1984 aa11.52□□□□□ -0.56
CAPN1-225ENST00000533704 A0A1B0GUA9 196 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 C19orf67A6NJJ6 358 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 PI4K2BG5E9Z4 385 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 C2CD2LO14523 706 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 DCXO43602 365 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 NR1I2O75469 434 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 ALADP13716 330 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 SP100P23497 879 aaPredicted RBP11.52□□□□□ -0.57
CAPN1-225ENST00000533704 ATP2C1P98194 919 aaPredicted RBP11.52□□□□□ -0.57
CAPN1-225ENST00000533704 SYCE2Q6PIF2 218 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 KCNK18Q7Z418 384 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 RABGGTAQ92696 567 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms