RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 SPRYD3Q8NCJ5 442 aa18.38■□□□□ 0.53
PKP3-209ENST00000533069 FAM193BQ96PV7 902 aaPredicted RBP18.38■□□□□ 0.53
PKP3-209ENST00000533069 TMEM175Q9BSA9 504 aa18.38■□□□□ 0.53
PKP3-209ENST00000533069 CCDC113Q9H0I3 377 aa18.38■□□□□ 0.53
PKP3-209ENST00000533069 GIT1Q9Y2X7 761 aa18.38■□□□□ 0.53
PKP3-209ENST00000533069 PCDHGC5Q9Y5F6 944 aa18.38■□□□□ 0.53
PKP3-209ENST00000533069 PHLPP2Q6ZVD8 1323 aa18.38■□□□□ 0.53
PKP3-209ENST00000533069 GRXCR2A6NFK2 248 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 ARL5CA6NH57 179 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 ACKR2O00590 384 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 N4BP3O15049 544 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 NPTXRO95502 500 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 PRKCBP05771 671 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 LONP1P36776 959 aaKnown RBP18.37■□□□□ 0.53
PKP3-209ENST00000533069 NDUFV1P49821 464 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 SMC1AQ14683 1233 aaKnown RBP18.37■□□□□ 0.53
PKP3-209ENST00000533069 SF3A1Q15459 793 aaKnown RBP18.37■□□□□ 0.53
PKP3-209ENST00000533069 ZRSR1Q15695 479 aaKnown RBP18.37■□□□□ 0.53
PKP3-209ENST00000533069 TMEM132AQ24JP5 1023 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 PLPP4Q5VZY2 271 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 RINT1Q6NUQ1 792 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 TMC7Q7Z402 723 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 KCNK18Q7Z418 384 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 IGSF21Q96ID5 467 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 PNMA5Q96PV4 448 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 GBP3Q9H0R5 595 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 NXF3Q9H4D5 531 aaKnown RBP18.37■□□□□ 0.53
PKP3-209ENST00000533069 C17orf75Q9HAS0 396 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 KCND2Q9NZV8 630 aa18.37■□□□□ 0.53
PKP3-209ENST00000533069 NT5C1B-RDH14C9J2C7 533 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 LINC01565O15544 149 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 TBX10O75333 385 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 POMCP01189 267 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 GALTP07902 379 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 SRGAP2BP0DMP2 458 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 GUCY2CP25092 1073 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 MLH1P40692 756 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 UBA7P41226 1012 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 SLC11A1P49279 550 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 DMP1Q13316 513 aaPredicted RBP18.36■□□□□ 0.53
PKP3-209ENST00000533069 DUSP6Q16828 381 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 TMEM119Q4V9L6 283 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 C1orf186Q6ZWK4 172 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 DDX53Q86TM3 631 aaKnown RBP18.36■□□□□ 0.53
PKP3-209ENST00000533069 RBM23Q86U06 439 aaKnown RBP18.36■□□□□ 0.53
PKP3-209ENST00000533069 CABP7Q86V35 215 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 ZNF280BQ86YH2 543 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 SYT2Q8N9I0 419 aaPredicted RBP18.36■□□□□ 0.53
PKP3-209ENST00000533069 CALML4Q96GE6 196 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 NECAB3Q96P71 396 aaPredicted RBP18.36■□□□□ 0.53
PKP3-209ENST00000533069 ADPGKQ9BRR6 497 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 RUSC1Q9BVN2 902 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 RNF39Q9H2S5 420 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 PDZD7Q9H5P4 517 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 DNAJB4Q9UDY4 337 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 KCNG1Q9UIX4 513 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 HES2Q9Y543 173 aa18.36■□□□□ 0.53
PKP3-209ENST00000533069 STX6O43752 255 aa18.35■□□□□ 0.53
PKP3-209ENST00000533069 HIP1RO75146 1068 aa18.35■□□□□ 0.53
PKP3-209ENST00000533069 AFF1P51825 1210 aaKnown RBP18.35■□□□□ 0.53
PKP3-209ENST00000533069 DLX2Q07687 328 aaPredicted RBP18.35■□□□□ 0.53
PKP3-209ENST00000533069 RESTQ13127 1097 aa18.35■□□□□ 0.53
PKP3-209ENST00000533069 SMAD4Q13485 552 aaKnown RBP18.35■□□□□ 0.53
PKP3-209ENST00000533069 GIT2Q14161 759 aa18.35■□□□□ 0.53
PKP3-209ENST00000533069 APBB1IPQ7Z5R6 666 aaPredicted RBP18.35■□□□□ 0.53
PKP3-209ENST00000533069 TMEM173Q86WV6 379 aaPredicted RBP18.35■□□□□ 0.53
PKP3-209ENST00000533069 CDR2LQ86X02 465 aaPredicted RBP18.35■□□□□ 0.53
PKP3-209ENST00000533069 DAW1Q8N136 415 aa18.35■□□□□ 0.53
PKP3-209ENST00000533069 GAD1Q99259 594 aa18.35■□□□□ 0.53
PKP3-209ENST00000533069 KIFC3Q9BVG8 833 aa18.35■□□□□ 0.53
PKP3-209ENST00000533069 APOL6Q9BWW8 343 aa18.35■□□□□ 0.53
PKP3-209ENST00000533069 CD207Q9UJ71 328 aa18.35■□□□□ 0.53
PKP3-209ENST00000533069 ATP6V1DQ9Y5K8 247 aa18.35■□□□□ 0.53
PKP3-209ENST00000533069 PLXNA4Q9HCM2 1894 aa18.35■□□□□ 0.53
PKP3-209ENST00000533069 PER2O15055 1255 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 DDHD2O94830 711 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 ALDH2P05091 517 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 SSBP05455 408 aaKnown RBP eCLIP18.34■□□□□ 0.53
PKP3-209ENST00000533069 IL9P15248 144 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 LIG1P18858 919 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 NPTX2P47972 431 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 PEX3P56589 373 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 MAPK7Q13164 816 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 DCAF4L1Q3SXM0 396 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 VPS52Q8N1B4 723 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 MRPL43Q8N983 215 aaKnown RBP18.34■□□□□ 0.53
PKP3-209ENST00000533069 MSLNLQ96KJ4 702 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 ZFP42Q96MM3 310 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 ZBP1Q9H171 429 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 ZSCAN16Q9H4T2 348 aaPredicted RBP18.34■□□□□ 0.53
PKP3-209ENST00000533069 POLD4Q9HCU8 107 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 CLEC1BQ9P126 229 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 PRKAG3Q9UGI9 489 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 FAN1Q9Y2M0 1017 aa18.34■□□□□ 0.53
PKP3-209ENST00000533069 ATG2AQ2TAZ0 1938 aa18.33■□□□□ 0.53
PKP3-209ENST00000533069 C2orf71A6NGG8 1288 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 CCDC169A6NNP5 214 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 HIDE1A8MVS5 230 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 K7ERI5 159 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms