RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 RIPOR3Q96MK2 946 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 TMEM175Q9BSA9 504 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 POLR3FQ9H1D9 316 aaPredicted RBP19.79■□□□□ 0.76
PCF11-206ENST00000533018 TMEM60Q9H2L4 133 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 POMKQ9H5K3 350 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 DZANK1Q9NVP4 752 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 STK39Q9UEW8 545 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 LIMCH1Q9UPQ0 1083 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 PRG3Q9Y2Y8 225 aaPredicted RBP19.79■□□□□ 0.76
PCF11-206ENST00000533018 IRAK3Q9Y616 596 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 ARL2P36404 184 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 MLH1P40692 756 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 MTHFRP42898 656 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 MBTD1Q05BQ5 628 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 SIGLEC14Q08ET2 396 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 GNL2Q13823 731 aaKnown RBP19.78■□□□□ 0.76
PCF11-206ENST00000533018 PTPN14Q15678 1187 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 PTPN21Q16825 1174 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 ATAT1Q5SQI0 421 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 PPFIBP1Q86W92 1011 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 HACE1Q8IYU2 909 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 CCDC51Q96ER9 411 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 GAD1Q99259 594 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 VN1R3Q9BXE9 311 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 CSRNP2Q9H175 543 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 RNF39Q9H2S5 420 aa19.78■□□□□ 0.76
PCF11-206ENST00000533018 MRPL17Q9NRX2 175 aaKnown RBP19.78■□□□□ 0.76
PCF11-206ENST00000533018 DBR1Q9UK59 544 aaKnown RBP19.78■□□□□ 0.76
PCF11-206ENST00000533018 ARL5CA6NH57 179 aa19.77■□□□□ 0.76
PCF11-206ENST00000533018 C2CD2LO14523 706 aa19.77■□□□□ 0.76
PCF11-206ENST00000533018 NR1I2O75469 434 aa19.77■□□□□ 0.76
PCF11-206ENST00000533018 XRCC6P12956 609 aaKnown RBP eCLIP19.77■□□□□ 0.762e-13■□□□□ 8.8
PCF11-206ENST00000533018 GLRA2P23416 452 aa19.77■□□□□ 0.76
PCF11-206ENST00000533018 POU5F1BQ06416 359 aa19.77■□□□□ 0.76
PCF11-206ENST00000533018 ST3GAL1Q11201 340 aa19.77■□□□□ 0.76
PCF11-206ENST00000533018 ZNF174Q15697 407 aa19.77■□□□□ 0.76
PCF11-206ENST00000533018 KCNH6Q9H252 994 aa19.77■□□□□ 0.76
PCF11-206ENST00000533018 PIEZO1Q92508 2521 aa19.77■□□□□ 0.76
PCF11-206ENST00000533018 ZDBF2Q9HCK1 2354 aa19.77■□□□□ 0.75
PCF11-206ENST00000533018 LRRIQ4A6NIV6 560 aa19.76■□□□□ 0.75
PCF11-206ENST00000533018 B4GALT5O43286 388 aa19.76■□□□□ 0.75
PCF11-206ENST00000533018 ARF4P18085 180 aaPredicted RBP19.76■□□□□ 0.75
PCF11-206ENST00000533018 TMC5Q6UXY8 1006 aa19.76■□□□□ 0.75
PCF11-206ENST00000533018 BMP8AQ7Z5Y6 402 aa19.76■□□□□ 0.75
PCF11-206ENST00000533018 ALYREFQ86V81 257 aaKnown RBP19.76■□□□□ 0.75
PCF11-206ENST00000533018 CDR2LQ86X02 465 aaPredicted RBP19.76■□□□□ 0.75
PCF11-206ENST00000533018 CATSPER3Q86XQ3 398 aa19.76■□□□□ 0.75
PCF11-206ENST00000533018 IFNLR1Q8IU57 520 aaPredicted RBP19.76■□□□□ 0.75
PCF11-206ENST00000533018 FAM184AQ8NB25 1140 aa19.76■□□□□ 0.75
PCF11-206ENST00000533018 ERMNQ8TAM6 284 aa19.76■□□□□ 0.75
PCF11-206ENST00000533018 SLC22A17Q8WUG5 538 aa19.76■□□□□ 0.75
PCF11-206ENST00000533018 ZFP42Q96MM3 310 aa19.76■□□□□ 0.75
PCF11-206ENST00000533018 KLHL5Q96PQ7 755 aa19.76■□□□□ 0.75
PCF11-206ENST00000533018 GPRC5CQ9NQ84 441 aa19.76■□□□□ 0.75
PCF11-206ENST00000533018 C2CD4DB7Z1M9 353 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 MED24O75448 989 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 NPTXRO95502 500 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 URODP06132 367 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 CNPP09543 421 aaKnown RBP19.75■□□□□ 0.75
PCF11-206ENST00000533018 SPATA31C1P0DKV0 1188 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 AKAP5P24588 427 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 SCNN1GP51170 649 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 AMHR2Q16671 573 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 TMEM132AQ24JP5 1023 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 SLC27A1Q6PCB7 646 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 COLGALT2Q8IYK4 626 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 NACC1Q96RE7 527 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 NFKBIZQ9BYH8 718 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 NXF3Q9H4D5 531 aaKnown RBP19.75■□□□□ 0.75
PCF11-206ENST00000533018 TUFT1Q9NNX1 390 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 PARP2Q9UGN5 583 aa19.75■□□□□ 0.75
PCF11-206ENST00000533018 SOD2P04179 222 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 OR52Z1P0C646 297 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 CLCN4P51793 760 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 NHLH1Q02575 133 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 KIAA1841Q6NSI8 718 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 ZBTB8OSQ8IWT0 167 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 FBXL6Q8N531 539 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 TDRD5Q8NAT2 981 aaKnown RBP19.74■□□□□ 0.75
PCF11-206ENST00000533018 KREMEN2Q8NCW0 462 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 MCPH1Q8NEM0 835 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 LLPHQ9BRT6 129 aaKnown RBP19.74■□□□□ 0.75
PCF11-206ENST00000533018 SFXN1Q9H9B4 322 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 MIOSQ9NXC5 875 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 KLK14Q9P0G3 267 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 SSX2IPQ9Y2D8 614 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 GIT1Q9Y2X7 761 aa19.74■□□□□ 0.75
PCF11-206ENST00000533018 LIG1P18858 919 aa19.73■□□□□ 0.75
PCF11-206ENST00000533018 MTMR3Q13615 1198 aa19.73■□□□□ 0.75
PCF11-206ENST00000533018 POTEGQ6S5H5 508 aa19.73■□□□□ 0.75
PCF11-206ENST00000533018 TAS1R1Q7RTX1 841 aa19.73■□□□□ 0.75
PCF11-206ENST00000533018 ZSCAN31Q96LW9 406 aaPredicted RBP19.73■□□□□ 0.75
PCF11-206ENST00000533018 POLR3CQ9BUI4 534 aaPredicted RBP19.73■□□□□ 0.75
PCF11-206ENST00000533018 COLEC11Q9BWP8 271 aa19.73■□□□□ 0.75
PCF11-206ENST00000533018 FOXP1Q9H334 677 aaPredicted RBP19.73■□□□□ 0.75
PCF11-206ENST00000533018 MARCH5Q9NX47 278 aa19.73■□□□□ 0.75
PCF11-206ENST00000533018 A0A1B0GUA9 196 aa19.72■□□□□ 0.75
PCF11-206ENST00000533018 ARHGEF35A5YM69 484 aa19.72■□□□□ 0.75
PCF11-206ENST00000533018 ADH1AP07327 375 aa19.72■□□□□ 0.75
PCF11-206ENST00000533018 GLUD2P49448 558 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms