RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	WNT8A	Q9H1J5	351 aa		20.76	■□□□□ 0.91
FGFR1-238	ENST00000532791	HERC5	Q9UII4	1024 aa	Known RBP	20.76	■□□□□ 0.91
FGFR1-238	ENST00000532791	EMSY	Q7Z589	1322 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	KRT14	P02533	472 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	LMNA	P02545	664 aa	Known RBP	20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	TRIM49	P0CI25	452 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	TRIM49C	P0CI26	452 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	PRAME	P78395	509 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	PDIA2	Q13087	525 aa	Known RBP	20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	DCAF4L1	Q3SXM0	396 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	SIK2	Q9H0K1	926 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	ASAP2	O43150	1006 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	AKR1B1	P15121	316 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	KYAT1	Q16773	422 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	BTBD8	Q5XKL5	378 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	NEDD1	Q8NHV4	660 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	TEKT2	Q9UIF3	430 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	EPHA7	Q15375	998 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	DUOXA2	Q1HG44	320 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	ORC4	O43929	436 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	TBCC	Q15814	346 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	SP8	Q8IXZ3	490 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	ZBED8	Q8IZ13	594 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	SMYD3	Q9H7B4	428 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	OVOS2	A0A0G2JMS6	1433 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	OVOS2	A0A0J9YW53	1432 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	OVOS2	Q6IE36	1432 aa		20.75	■□□□□ 0.91
FGFR1-238	ENST00000532791	MAGOH	P61326	146 aa	Known RBP	20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	HAUS6	Q7Z4H7	955 aa		20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	LDHD	Q86WU2	507 aa		20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	ST13P4	Q8IZP2	240 aa	Predicted RBP	20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	AP1AR	Q63HQ0	302 aa		20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	LZIC	Q8WZA0	190 aa		20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	ISCA1	Q9BUE6	129 aa		20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	DDX47	Q9H0S4	455 aa	Known RBP	20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	SNF8	Q96H20	258 aa		20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	TRIM62	Q9BVG3	475 aa		20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	KIFC3	Q9BVG8	833 aa		20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	MAP3K4	Q9Y6R4	1608 aa		20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	TAS2R42	Q7RTR8	314 aa		20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	TRPV6	Q9H1D0	765 aa		20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	MRPL40	Q9NQ50	206 aa	Known RBP	20.74	■□□□□ 0.91
FGFR1-238	ENST00000532791	FAM84B	Q96KN1	310 aa	Predicted RBP	20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	PARVA	Q9NVD7	372 aa		20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	ATP5H	O75947	161 aa		20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	ZFX	P17010	805 aa	Predicted RBP	20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	EFNA5	P52803	228 aa		20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	RAD51	Q06609	339 aa		20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	GLYCTK	Q8IVS8	523 aa		20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	GSPT2	Q8IYD1	628 aa	Known RBP	20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	RAPGEF5	Q92565	580 aa		20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	AXIN2	Q9Y2T1	843 aa		20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	RALA	P11233	206 aa		20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	TAP1	Q03518	808 aa		20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	OR6P1	Q8NGX9	317 aa		20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	UBA6	A0AVT1	1052 aa	Predicted RBP	20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	GGCX	P38435	758 aa		20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	VEPH1	Q14D04	833 aa		20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	BEND6	Q5SZJ8	279 aa	Predicted RBP	20.73	■□□□□ 0.91
FGFR1-238	ENST00000532791	TTC26	A0AVF1	554 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	HAUS5	O94927	633 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	CDH6	P55285	790 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	POLE2	P56282	527 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	DMTN	Q08495	405 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	SH3KBP1	Q96B97	665 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	TEX12	Q9BXU0	123 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	NDFIP2	Q9NV92	336 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	ITM2B	Q9Y287	266 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	DIAPH2	O60879	1101 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	EYA4	O95677	639 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	LCP1	P13796	627 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	JPH1	Q9HDC5	661 aa	Predicted RBP	20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	AFF4	Q9UHB7	1163 aa	Known RBP	20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	PFAS	O15067	1338 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	FAM187A	A6NFU0	413 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	YWHAB	P31946	246 aa	Known RBP	20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	HMGCS2	P54868	508 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	ATP2C1	P98194	919 aa	Predicted RBP	20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	KCNV1	Q6PIU1	500 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	CCDC137	Q6PK04	289 aa	Known RBP	20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	ATP11C	Q8NB49	1132 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	MLXIPL	Q9NP71	852 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	DFFA	O00273	331 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	ZNF235	Q14590	738 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	STAG2	Q8N3U4	1231 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	RNF149	Q8NC42	400 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	TRIM45	Q9H8W5	580 aa	Predicted RBP	20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	PPP4R4	Q6NUP7	873 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	FRMD5	Q7Z6J6	570 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	TUFT1	Q9NNX1	390 aa		20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	SPATS2L	Q9NUQ6	558 aa	Known RBP	20.72	■□□□□ 0.91
FGFR1-238	ENST00000532791	MCF2	P10911	925 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	SSTR3	P32745	418 aa	Predicted RBP	20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	EFTUD2	Q15029	972 aa	Known RBP eCLIP	20.71	■□□□□ 0.91	1e-6	■■■□□ 17.6
FGFR1-238	ENST00000532791	C1orf146	Q5VVC0	180 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	RPAIN	Q86UA6	219 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	RFFL	Q8WZ73	363 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	TNIP3	Q96KP6	325 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	TSR3	Q9UJK0	312 aa	Known RBP	20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	SUFU	Q9UMX1	484 aa		20.71	■□□□□ 0.91

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms