RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 FAM13AO94988 1023 aa21.86■■□□□ 1.09
CPSF1-209ENST00000532725 MAPTP10636 758 aaKnown RBP21.86■■□□□ 1.09
CPSF1-209ENST00000532725 CTNNB1P35222 781 aa21.86■■□□□ 1.09
CPSF1-209ENST00000532725 NCKAP1LP55160 1127 aa21.86■■□□□ 1.09
CPSF1-209ENST00000532725 GPM6BQ13491 265 aa21.86■■□□□ 1.09
CPSF1-209ENST00000532725 EEF1DP3Q658K8 133 aa21.86■■□□□ 1.09
CPSF1-209ENST00000532725 ADALQ6DHV7 355 aa21.86■■□□□ 1.09
CPSF1-209ENST00000532725 GLB1LQ6UWU2 654 aa21.86■■□□□ 1.09
CPSF1-209ENST00000532725 DYMQ7RTS9 669 aa21.86■■□□□ 1.09
CPSF1-209ENST00000532725 MYCT1Q8N699 235 aa21.86■■□□□ 1.09
CPSF1-209ENST00000532725 RSPH1Q8WYR4 309 aa21.86■■□□□ 1.09
CPSF1-209ENST00000532725 DNAJC19Q96DA6 116 aa21.86■■□□□ 1.09
CPSF1-209ENST00000532725 FIZ1Q96SL8 496 aa21.86■■□□□ 1.09
CPSF1-209ENST00000532725 SCAND2PQ9GZW5 306 aaPredicted RBP21.86■■□□□ 1.09
CPSF1-209ENST00000532725 LMCD1Q9NZU5 365 aa21.86■■□□□ 1.09
CPSF1-209ENST00000532725 PHLPP2Q6ZVD8 1323 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 NPTXRO95502 500 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 ITGA4P13612 1032 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 AFF1P51825 1210 aaKnown RBP21.85■■□□□ 1.09
CPSF1-209ENST00000532725 NOMO2Q5JPE7 1267 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 ATF7IP2Q5U623 682 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 LRRC43Q8N309 656 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 IQUBQ8NA54 791 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 P2RX5Q93086 422 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 ACO2Q99798 780 aaKnown RBP21.85■■□□□ 1.09
CPSF1-209ENST00000532725 TRIM6Q9C030 488 aaPredicted RBP21.85■■□□□ 1.09
CPSF1-209ENST00000532725 RSAD1Q9HA92 442 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 PTPRHQ9HD43 1115 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 UBN1Q9NPG3 1134 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 KBTBD4Q9NVX7 518 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 FAM13BQ9NYF5 915 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 PLAGL2Q9UPG8 496 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 TNFSF13BQ9Y275 285 aa21.85■■□□□ 1.09
CPSF1-209ENST00000532725 PRRC2BQ5JSZ5 2229 aaKnown RBP21.85■■□□□ 1.09
CPSF1-209ENST00000532725 POLR2DO15514 142 aaKnown RBP21.84■■□□□ 1.09
CPSF1-209ENST00000532725 TRAK2O60296 914 aa21.84■■□□□ 1.09
CPSF1-209ENST00000532725 CMA1P23946 247 aa21.84■■□□□ 1.09
CPSF1-209ENST00000532725 SPOUT1Q5T280 376 aaKnown RBP21.84■■□□□ 1.09
CPSF1-209ENST00000532725 HAUS6Q7Z4H7 955 aa21.84■■□□□ 1.09
CPSF1-209ENST00000532725 KLHL23Q8NBE8 558 aa21.84■■□□□ 1.09
CPSF1-209ENST00000532725 MAFAQ8NHW3 353 aaPredicted RBP21.84■■□□□ 1.09
CPSF1-209ENST00000532725 DHX58Q96C10 678 aa21.84■■□□□ 1.09
CPSF1-209ENST00000532725 C11orf84Q9BUA3 381 aaPredicted RBP21.84■■□□□ 1.09
CPSF1-209ENST00000532725 TARS2Q9BW92 718 aaKnown RBP21.84■■□□□ 1.09
CPSF1-209ENST00000532725 MRPL9Q9BYD2 267 aaKnown RBP21.84■■□□□ 1.09
CPSF1-209ENST00000532725 MRPL4Q9BYD3 311 aaKnown RBP21.84■■□□□ 1.09
CPSF1-209ENST00000532725 CUEDC2Q9H467 287 aa21.84■■□□□ 1.09
CPSF1-209ENST00000532725 NXF3Q9H4D5 531 aaKnown RBP21.84■■□□□ 1.09
CPSF1-209ENST00000532725 AAASQ9NRG9 546 aa21.84■■□□□ 1.09
CPSF1-209ENST00000532725 H0YCG3 227 aa21.83■■□□□ 1.09
CPSF1-209ENST00000532725 INPPL1O15357 1258 aa21.83■■□□□ 1.09
CPSF1-209ENST00000532725 GTPBP6O43824 516 aaPredicted RBP21.83■■□□□ 1.09
CPSF1-209ENST00000532725 TBCAO75347 108 aaKnown RBP21.83■■□□□ 1.09
CPSF1-209ENST00000532725 TMEM132AQ24JP5 1023 aa21.83■■□□□ 1.09
CPSF1-209ENST00000532725 COLGALT1Q8NBJ5 622 aa21.83■■□□□ 1.09
CPSF1-209ENST00000532725 SPPL3Q8TCT6 385 aa21.83■■□□□ 1.09
CPSF1-209ENST00000532725 STAMQ92783 540 aa21.83■■□□□ 1.09
CPSF1-209ENST00000532725 ZHX3Q9H4I2 956 aa21.83■■□□□ 1.09
CPSF1-209ENST00000532725 TBC1D13Q9NVG8 400 aa21.83■■□□□ 1.09
CPSF1-209ENST00000532725 KCNH3Q9ULD8 1083 aa21.83■■□□□ 1.09
CPSF1-209ENST00000532725 GIT1Q9Y2X7 761 aa21.83■■□□□ 1.09
CPSF1-209ENST00000532725 PCDHB12Q9Y5F1 795 aa21.83■■□□□ 1.09
CPSF1-209ENST00000532725 MYH11P35749 1972 aa21.83■■□□□ 1.08
CPSF1-209ENST00000532725 TCHHQ07283 1943 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 GRM6O15303 877 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 ITGB1P05556 798 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 LAG3P18627 525 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 SCP2P22307 547 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 AKAP5P24588 427 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 STRN3Q13033 797 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 HACE1Q8IYU2 909 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 GAD1Q99259 594 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 ADPGKQ9BRR6 497 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 TNMDQ9H2S6 317 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 ALG13Q9NP73 1137 aaKnown RBP21.82■■□□□ 1.08
CPSF1-209ENST00000532725 MIOSQ9NXC5 875 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 KANSL3Q9P2N6 904 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 INPP5FQ9Y2H2 1132 aa21.82■■□□□ 1.08
CPSF1-209ENST00000532725 RALGAPA2Q2PPJ7 1873 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 NLRC5Q86WI3 1866 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 FRMD3A2A2Y4 597 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 ARL5CA6NH57 179 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 ABLIM1O14639 778 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 PROZP22891 400 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 NMT1P30419 496 aaKnown RBP21.81■■□□□ 1.08
CPSF1-209ENST00000532725 GTF2BQ00403 316 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 CAMK1Q14012 370 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 KCNT2Q6UVM3 1135 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 ZNF720Q7Z2F6 126 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 ZNF280BQ86YH2 543 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 FAM178BQ8IXR5 827 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 GSTCDQ8NEC7 633 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 MRPL38Q96DV4 380 aaKnown RBP21.81■■□□□ 1.08
CPSF1-209ENST00000532725 APOL6Q9BWW8 343 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 LRRC27Q9C0I9 530 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 ST6GALNAC4Q9H4F1 302 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 NRDE2Q9H7Z3 1164 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 TBX20Q9UMR3 447 aa21.81■■□□□ 1.08
CPSF1-209ENST00000532725 A0A1B0GVL5 298 aa21.8■■□□□ 1.08
CPSF1-209ENST00000532725 AMPD3Q01432 767 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms