RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 NFIAQ12857 509 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 XKR3Q5GH77 459 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 TRIM67Q6ZTA4 783 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 TXNRD3Q86VQ6 643 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 SEPT1Q8WYJ6 367 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 DHX38Q92620 1227 aaKnown RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 KIF12Q96FN5 646 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 EPAS1Q99814 870 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 TACO1Q9BSH4 297 aaKnown RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 SMARCAD1Q9H4L7 1026 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 POLRMTO00411 1230 aaKnown RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 PRKCBP05771 671 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 EFNA5P52803 228 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 PRKCQQ04759 706 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 RWDD4Q6NW29 188 aaKnown RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 TMEM35BQ8NCS4 154 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 KAZALD1Q96I82 304 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 LRRC37BQ96QE4 947 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 KIFC3Q9BVG8 833 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 KATNAL1Q9BW62 490 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 NFKBIL1Q9UBC1 381 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 FOXN1O15353 648 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 ECEL1O95672 775 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 CTSHP09668 335 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 CAP2P40123 477 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 ARL4DP49703 201 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 BASP1P80723 227 aaKnown RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 ANKS3Q6ZW76 656 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 CHST13Q8NET6 341 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 TMEM143Q96AN5 459 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 FAM217BQ9NTX9 383 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 FBXO2Q9UK22 296 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 TPX2Q9ULW0 747 aaKnown RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 DAAM1Q9Y4D1 1078 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 FARP1Q9Y4F1 1045 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 CNTNAP5Q8WYK1 1306 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 RICTORQ6R327 1708 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 SYNDIG1LA6NDD5 238 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 CREB3O43889 395 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 EEF1DP29692 281 aaKnown RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 NMT1P30419 496 aaKnown RBP9.3□□□□□ -0.92
CTNND1-232ENST00000532649 YIPF2Q9BWQ6 316 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 BAIAP2L1Q9UHR4 511 aa9.3□□□□□ -0.92
CTNND1-232ENST00000532649 PFDN1O60925 122 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 MAP2K2P36507 400 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 ESRRGP62508 458 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 NSUN2Q08J23 767 aaKnown RBP eCLIP9.29□□□□□ -0.92
CTNND1-232ENST00000532649 SPOPLQ6IQ16 392 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 GUF1Q8N442 669 aaKnown RBP9.29□□□□□ -0.92
CTNND1-232ENST00000532649 PAWRQ96IZ0 340 aaKnown RBP9.29□□□□□ -0.92
CTNND1-232ENST00000532649 UBXN8O00124 270 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 DGAT1O75907 488 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 TBXAS1P24557 533 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-232ENST00000532649 OAS2P29728 719 aaKnown RBP9.29□□□□□ -0.92
CTNND1-232ENST00000532649 KRT39Q6A163 491 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 NUDT18Q6ZVK8 323 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 TADA2BQ86TJ2 420 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 RAB42Q8N4Z0 105 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 NRBF2Q96F24 287 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 NUDT12Q9BQG2 462 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.29□□□□□ -0.92
CTNND1-232ENST00000532649 UBE4BO95155 1302 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 NWD1Q149M9 1564 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 NEURL4Q96JN8 1562 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 POC1B-GALNT4F8VUJ3 575 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 M0QYV0 167 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 EEF1B2P24534 225 aaKnown RBP9.29□□□□□ -0.92
CTNND1-232ENST00000532649 GTF2A2P52657 109 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 CXCL9Q07325 125 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 FLOT2Q14254 428 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 RHOT2Q8IXI1 618 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 NCLNQ969V3 563 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 PBKQ96KB5 322 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 TRIM55Q9BYV6 548 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 TRIM4Q9C037 500 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 INTS2Q9H0H0 1204 aaKnown RBP9.29□□□□□ -0.92
CTNND1-232ENST00000532649 CLCA2Q9UQC9 943 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 GOLGA8KD6RF30 607 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 TRIM49P0CI25 452 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 TRIM49CP0CI26 452 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 PAMP19021 973 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 DRP2Q13474 957 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 NBPF9Q3BBW0 867 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 PPP6R3Q5H9R7 873 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-232ENST00000532649 C3orf67Q6ZVT6 689 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 TEX2Q8IWB9 1127 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 ANLNQ9NQW6 1124 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 FBXO28Q9NVF7 368 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 CHCHD3Q9NX63 227 aaKnown RBP9.29□□□□□ -0.92
CTNND1-232ENST00000532649 CNOT8Q9UFF9 292 aaKnown RBP9.29□□□□□ -0.92
CTNND1-232ENST00000532649 ANAPC7Q9UJX3 599 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 LRRC53A6NM62 1247 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 C2orf54Q08AI8 447 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 ACER1Q8TDN7 264 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 DEPDC1BQ8WUY9 529 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 ACAP3Q96P50 834 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 GINM1Q9NU53 330 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 HPCAL4Q9UM19 191 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 TAF6LQ9Y6J9 622 aa9.29□□□□□ -0.92
CTNND1-232ENST00000532649 TBX3O15119 743 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms