RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 CCDC169A6NNP5 214 aa25.34■■□□□ 1.65
CAPN1-222ENST00000532285 NPTXRO95502 500 aa25.34■■□□□ 1.65
CAPN1-222ENST00000532285 NPTX2P47972 431 aa25.34■■□□□ 1.65
CAPN1-222ENST00000532285 PEX3P56589 373 aa25.34■■□□□ 1.65
CAPN1-222ENST00000532285 DMP1Q13316 513 aaPredicted RBP25.34■■□□□ 1.65
CAPN1-222ENST00000532285 TMEM132AQ24JP5 1023 aa25.34■■□□□ 1.65
CAPN1-222ENST00000532285 CDR2LQ86X02 465 aaPredicted RBP25.34■■□□□ 1.65
CAPN1-222ENST00000532285 FAM193BQ96PV7 902 aaPredicted RBP25.34■■□□□ 1.65
CAPN1-222ENST00000532285 KIFC3Q9BVG8 833 aa25.34■■□□□ 1.65
CAPN1-222ENST00000532285 GBP3Q9H0R5 595 aa25.34■■□□□ 1.65
CAPN1-222ENST00000532285 RNF39Q9H2S5 420 aa25.34■■□□□ 1.65
CAPN1-222ENST00000532285 GIT1Q9Y2X7 761 aa25.34■■□□□ 1.65
CAPN1-222ENST00000532285 HES2Q9Y543 173 aa25.34■■□□□ 1.65
CAPN1-222ENST00000532285 SRPRBQ9Y5M8 271 aaKnown RBP25.34■■□□□ 1.65
CAPN1-222ENST00000532285 K7ERI5 159 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 INPPL1O15357 1258 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 LIG1P18858 919 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 KCNA5P22460 613 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 MARCKSP29966 332 aaPredicted RBP25.33■■□□□ 1.65
CAPN1-222ENST00000532285 ERVFC1P60507 584 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 CEBPZQ03701 1054 aaKnown RBP25.33■■□□□ 1.65
CAPN1-222ENST00000532285 MAPK7Q13164 816 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 CTC1Q2NKJ3 1217 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 LEXMQ3ZCV2 418 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 RASSF8Q8NHQ8 419 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 NXF3Q9H4D5 531 aaKnown RBP25.33■■□□□ 1.65
CAPN1-222ENST00000532285 PDZD7Q9H5P4 517 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 IGFLR1Q9H665 355 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 CLDND1Q9NY35 253 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 KCNG1Q9UIX4 513 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 RBM19Q9Y4C8 960 aaKnown RBP25.33■■□□□ 1.65
CAPN1-222ENST00000532285 CUL9Q8IWT3 2517 aa25.33■■□□□ 1.65
CAPN1-222ENST00000532285 ARL5CA6NH57 179 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 TTLL13PA6NNM8 815 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 NT5C1B-RDH14C9J2C7 533 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 FSCN2O14926 492 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 GALTP07902 379 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 AFF1P51825 1210 aaKnown RBP25.32■■□□□ 1.64
CAPN1-222ENST00000532285 EP400NLQ6ZTU2 488 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 ADGRD2Q7Z7M1 963 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 ZNF280BQ86YH2 543 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 TMEM169Q96HH4 297 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 GAD1Q99259 594 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 ADPGKQ9BRR6 497 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 APOL6Q9BWW8 343 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 CCSER1Q9C0I3 900 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 TMEM134Q9H6X4 195 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 NGRNQ9NPE2 291 aaKnown RBP25.32■■□□□ 1.64
CAPN1-222ENST00000532285 KMT5AQ9NQR1 393 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 DNAJB4Q9UDY4 337 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 FBXO2Q9UK22 296 aaPredicted RBP25.32■■□□□ 1.64
CAPN1-222ENST00000532285 MORC2Q9Y6X9 1032 aaPredicted RBP25.32■■□□□ 1.64
CAPN1-222ENST00000532285 PHLPP2Q6ZVD8 1323 aa25.32■■□□□ 1.64
CAPN1-222ENST00000532285 ZMYM2Q9UBW7 1377 aa25.31■■□□□ 1.64
CAPN1-222ENST00000532285 POMCP01189 267 aa25.31■■□□□ 1.64
CAPN1-222ENST00000532285 MLH1P40692 756 aa25.31■■□□□ 1.64
CAPN1-222ENST00000532285 RAD51AP2Q09MP3 1159 aa25.31■■□□□ 1.64
CAPN1-222ENST00000532285 SLC39A14Q15043 492 aa25.31■■□□□ 1.64
CAPN1-222ENST00000532285 KARSQ15046 597 aaKnown RBP25.31■■□□□ 1.64
CAPN1-222ENST00000532285 ADAMTS19Q8TE59 1207 aa25.31■■□□□ 1.64
CAPN1-222ENST00000532285 USP28Q96RU2 1077 aa25.31■■□□□ 1.64
CAPN1-222ENST00000532285 TMEM175Q9BSA9 504 aa25.31■■□□□ 1.64
CAPN1-222ENST00000532285 NTPCRQ9BSD7 190 aaKnown RBP25.31■■□□□ 1.64
CAPN1-222ENST00000532285 TLE6Q9H808 572 aa25.31■■□□□ 1.64
CAPN1-222ENST00000532285 ENTPD7Q9NQZ7 604 aa25.31■■□□□ 1.64
CAPN1-222ENST00000532285 PCDHGC5Q9Y5F6 944 aa25.31■■□□□ 1.64
CAPN1-222ENST00000532285 SFI1A8K8P3 1242 aa25.3■■□□□ 1.64
CAPN1-222ENST00000532285 DDHD2O94830 711 aa25.3■■□□□ 1.64
CAPN1-222ENST00000532285 ALDH2P05091 517 aa25.3■■□□□ 1.64
CAPN1-222ENST00000532285 EDN1P05305 212 aa25.3■■□□□ 1.64
CAPN1-222ENST00000532285 PLCG1P19174 1290 aa25.3■■□□□ 1.64
CAPN1-222ENST00000532285 AKAP5P24588 427 aa25.3■■□□□ 1.64
CAPN1-222ENST00000532285 GTF2F1P35269 517 aaKnown RBP eCLIP25.3■■□□□ 1.644e-13■■■■□ 21.8
CAPN1-222ENST00000532285 NRIP1P48552 1158 aa25.3■■□□□ 1.64
CAPN1-222ENST00000532285 ADAM15Q13444 863 aa25.3■■□□□ 1.64
CAPN1-222ENST00000532285 IGSF21Q96ID5 467 aa25.3■■□□□ 1.64
CAPN1-222ENST00000532285 TCF25Q9BQ70 676 aa25.3■■□□□ 1.64
CAPN1-222ENST00000532285 ARHGAP28Q9P2N2 729 aa25.3■■□□□ 1.64
CAPN1-222ENST00000532285 FSD2A1L4K1 749 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 B4GALT3O60512 393 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 PLS3P13797 630 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 LTBRP36941 435 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 SLC11A1P49279 550 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 BMS1Q14692 1282 aaKnown RBP25.29■■□□□ 1.64
CAPN1-222ENST00000532285 PUS10Q3MIT2 529 aaKnown RBP25.29■■□□□ 1.64
CAPN1-222ENST00000532285 ARSHQ5FYA8 562 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 NT5DC1Q5TFE4 455 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 ATF7IP2Q5U623 682 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 PLPP4Q5VZY2 271 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 TMC7Q7Z402 723 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 APBB1IPQ7Z5R6 666 aaPredicted RBP25.29■■□□□ 1.64
CAPN1-222ENST00000532285 RBM23Q86U06 439 aaKnown RBP25.29■■□□□ 1.64
CAPN1-222ENST00000532285 EFHBQ8N7U6 833 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 SPIRE2Q8WWL2 714 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 RAD54LQ92698 747 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 EPSTI1Q96J88 318 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 ZFP42Q96MM3 310 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 BLOC1S4Q9NUP1 217 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 PARP2Q9UGN5 583 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 USP20Q9Y2K6 914 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms