RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 KIFC3Q9BVG8 833 aa25.31■■□□□ 1.64
PPP1CA-207ENST00000532279 NGRNQ9NPE2 291 aaKnown RBP25.31■■□□□ 1.64
PPP1CA-207ENST00000532279 UBN1Q9NPG3 1134 aa25.31■■□□□ 1.64
PPP1CA-207ENST00000532279 KANSL3Q9P2N6 904 aa25.31■■□□□ 1.64
PPP1CA-207ENST00000532279 FAM50BQ9Y247 325 aa25.31■■□□□ 1.64
PPP1CA-207ENST00000532279 NCOR1O75376 2440 aa25.3■■□□□ 1.64
PPP1CA-207ENST00000532279 A0A1B0GUA9 196 aa25.3■■□□□ 1.64
PPP1CA-207ENST00000532279 KCNK18Q7Z418 384 aa25.3■■□□□ 1.64
PPP1CA-207ENST00000532279 BRAPQ7Z569 592 aa25.3■■□□□ 1.64
PPP1CA-207ENST00000532279 FAM178BQ8IXR5 827 aa25.3■■□□□ 1.64
PPP1CA-207ENST00000532279 KIFAP3Q92845 792 aa25.3■■□□□ 1.64
PPP1CA-207ENST00000532279 IGSF21Q96ID5 467 aa25.3■■□□□ 1.64
PPP1CA-207ENST00000532279 PRIMPOLQ96LW4 560 aa25.3■■□□□ 1.64
PPP1CA-207ENST00000532279 PLIN2Q99541 437 aa25.3■■□□□ 1.64
PPP1CA-207ENST00000532279 CDCA3Q99618 268 aaPredicted RBP25.3■■□□□ 1.64
PPP1CA-207ENST00000532279 FZD8Q9H461 694 aa25.3■■□□□ 1.64
PPP1CA-207ENST00000532279 FOXD4L1Q9NU39 408 aa25.3■■□□□ 1.64
PPP1CA-207ENST00000532279 CLEC1BQ9P126 229 aa25.3■■□□□ 1.64
PPP1CA-207ENST00000532279 MYH11P35749 1972 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 ARL5CA6NH57 179 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 TTLL13PA6NNM8 815 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 PRKCBP05771 671 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 AKAP5P24588 427 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 PRPF4BQ13523 1007 aaKnown RBP25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 SMC1AQ14683 1233 aaKnown RBP25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 MAPK6Q16659 721 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 FAM187BQ17R55 369 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 ARL6IP4Q66PJ3 421 aaKnown RBP25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 HACE1Q8IYU2 909 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 VPS52Q8N1B4 723 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 VN1R2Q8NFZ6 395 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 BCL7CQ8WUZ0 217 aaPredicted RBP25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 ZFP42Q96MM3 310 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 RUSC1Q9BVN2 902 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 USP20Q9Y2K6 914 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 GTF3C3Q9Y5Q9 886 aa25.29■■□□□ 1.64
PPP1CA-207ENST00000532279 CARNS1A5YM72 827 aa25.28■■□□□ 1.64
PPP1CA-207ENST00000532279 MBTPS2O43462 519 aa25.28■■□□□ 1.64
PPP1CA-207ENST00000532279 PDCP20941 246 aa25.28■■□□□ 1.64
PPP1CA-207ENST00000532279 SSTR3P32745 418 aaPredicted RBP25.28■■□□□ 1.64
PPP1CA-207ENST00000532279 SMAD4Q13485 552 aaKnown RBP25.28■■□□□ 1.64
PPP1CA-207ENST00000532279 LLGL2Q6P1M3 1020 aa25.28■■□□□ 1.64
PPP1CA-207ENST00000532279 CDK5RAP3Q96JB5 506 aa25.28■■□□□ 1.64
PPP1CA-207ENST00000532279 MSLNLQ96KJ4 702 aa25.28■■□□□ 1.64
PPP1CA-207ENST00000532279 CCDC113Q9H0I3 377 aa25.28■■□□□ 1.64
PPP1CA-207ENST00000532279 CD320Q9NPF0 282 aa25.28■■□□□ 1.64
PPP1CA-207ENST00000532279 HIP1RO75146 1068 aa25.27■■□□□ 1.64
PPP1CA-207ENST00000532279 SSBP05455 408 aaKnown RBP eCLIP25.27■■□□□ 1.64
PPP1CA-207ENST00000532279 SCNN1GP51170 649 aa25.27■■□□□ 1.64
PPP1CA-207ENST00000532279 BMS1Q14692 1282 aaKnown RBP25.27■■□□□ 1.64
PPP1CA-207ENST00000532279 RINT1Q6NUQ1 792 aa25.27■■□□□ 1.64
PPP1CA-207ENST00000532279 DDX53Q86TM3 631 aaKnown RBP25.27■■□□□ 1.64
PPP1CA-207ENST00000532279 PNMA5Q96PV4 448 aa25.27■■□□□ 1.64
PPP1CA-207ENST00000532279 PDZD7Q9H5P4 517 aa25.27■■□□□ 1.64
PPP1CA-207ENST00000532279 MIOSQ9NXC5 875 aa25.27■■□□□ 1.64
PPP1CA-207ENST00000532279 KLK14Q9P0G3 267 aa25.27■■□□□ 1.64
PPP1CA-207ENST00000532279 PARP2Q9UGN5 583 aa25.27■■□□□ 1.64
PPP1CA-207ENST00000532279 FAN1Q9Y2M0 1017 aa25.27■■□□□ 1.64
PPP1CA-207ENST00000532279 GIT1Q9Y2X7 761 aa25.27■■□□□ 1.64
PPP1CA-207ENST00000532279 FSD2A1L4K1 749 aa25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 C2orf71A6NGG8 1288 aa25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 CCDC169A6NNP5 214 aa25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 K7ELQ4 463 aaPredicted RBP25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 N4BP3O15049 544 aa25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 CXCL14O95715 111 aa25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 ALDH2P05091 517 aa25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 EDN1P05305 212 aa25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 SMAD2Q15796 467 aaKnown RBP25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 HYIQ5T013 277 aa25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 MRPL43Q8N983 215 aaKnown RBP25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 AUTS2Q8WXX7 1259 aa25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 TMEM175Q9BSA9 504 aa25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 NT5C3AQ9H0P0 336 aa25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 ZBP1Q9H171 429 aa25.26■■□□□ 1.63
PPP1CA-207ENST00000532279 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 ACKR2O00590 384 aa25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 NRP1O14786 923 aa25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 INPPL1O15357 1258 aa25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 EFNA5P52803 228 aa25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 PEX3P56589 373 aa25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 RAD51AP2Q09MP3 1159 aa25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 COASYQ13057 564 aa25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 SF3A1Q15459 793 aaKnown RBP25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 C1orf186Q6ZWK4 172 aa25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 CABP7Q86V35 215 aa25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 GJD3Q8N144 294 aa25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 VN1R3Q9BXE9 311 aa25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 PRG3Q9Y2Y8 225 aaPredicted RBP25.25■■□□□ 1.63
PPP1CA-207ENST00000532279 BMP15O95972 392 aa25.24■■□□□ 1.63
PPP1CA-207ENST00000532279 SRGAP2BP0DMP2 458 aa25.24■■□□□ 1.63
PPP1CA-207ENST00000532279 SYT1P21579 422 aa25.24■■□□□ 1.63
PPP1CA-207ENST00000532279 OR1G1P47890 313 aa25.24■■□□□ 1.63
PPP1CA-207ENST00000532279 NPTX2P47972 431 aa25.24■■□□□ 1.63
PPP1CA-207ENST00000532279 DMP1Q13316 513 aaPredicted RBP25.24■■□□□ 1.63
PPP1CA-207ENST00000532279 COLGALT2Q8IYK4 626 aa25.24■■□□□ 1.63
PPP1CA-207ENST00000532279 DAW1Q8N136 415 aa25.24■■□□□ 1.63
PPP1CA-207ENST00000532279 SMRP1Q8NCR6 262 aa25.24■■□□□ 1.63
PPP1CA-207ENST00000532279 INTS4Q96HW7 963 aaKnown RBP25.24■■□□□ 1.63
PPP1CA-207ENST00000532279 DRC1Q96MC2 740 aa25.24■■□□□ 1.63
PPP1CA-207ENST00000532279 ADPGKQ9BRR6 497 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms