RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 DUSP2Q05923 314 aa4.72□□□□□ -1.65
ATM-217ENST00000531957 FSTL1Q12841 308 aa4.72□□□□□ -1.65
ATM-217ENST00000531957 ATP13A4Q4VNC1 1196 aa4.72□□□□□ -1.65
ATM-217ENST00000531957 CT83Q5H943 113 aa4.72□□□□□ -1.65
ATM-217ENST00000531957 TAS1R1Q7RTX1 841 aa4.72□□□□□ -1.65
ATM-217ENST00000531957 CPT1CQ8TCG5 803 aa4.72□□□□□ -1.65
ATM-217ENST00000531957 SLC25A43Q8WUT9 341 aaPredicted RBP4.72□□□□□ -1.65
ATM-217ENST00000531957 IL17RAQ96F46 866 aa4.72□□□□□ -1.65
ATM-217ENST00000531957 MLST8Q9BVC4 326 aa4.72□□□□□ -1.65
ATM-217ENST00000531957 LSM14BQ9BX40 385 aaKnown RBP4.72□□□□□ -1.65
ATM-217ENST00000531957 ZNF768Q9H5H4 540 aaKnown RBP4.72□□□□□ -1.65
ATM-217ENST00000531957 NOC2LQ9Y3T9 749 aaKnown RBP4.72□□□□□ -1.65
ATM-217ENST00000531957 NUMBLQ9Y6R0 609 aa4.72□□□□□ -1.65
ATM-217ENST00000531957 ENPP3O14638 875 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 NRP2O60462 931 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 DNAJC6O75061 913 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 TMEM127O75204 238 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 SCAF4O95104 1147 aaKnown RBP4.71□□□□□ -1.66
ATM-217ENST00000531957 PTGS2P35354 604 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 GPR15P49685 360 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 LGALS4P56470 323 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 NRG3P56975 720 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 PDCD1Q15116 288 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 UBE3CQ15386 1083 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 DCAF17Q5H9S7 520 aaPredicted RBP4.71□□□□□ -1.66
ATM-217ENST00000531957 PITRM1Q5JRX3 1037 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 ABHD15Q6UXT9 468 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 HDGFL2Q7Z4V5 671 aaPredicted RBP4.71□□□□□ -1.66
ATM-217ENST00000531957 MRGPREQ86SM8 312 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 SLC41A1Q8IVJ1 513 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 GLB1L2Q8IW92 636 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 RPUSD2Q8IZ73 545 aaKnown RBP4.71□□□□□ -1.66
ATM-217ENST00000531957 UBR7Q8N806 425 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 USP7Q93009 1102 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 TTPALQ9BTX7 342 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 KCTD10Q9H3F6 313 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 TNFRSF18Q9Y5U5 241 aa4.71□□□□□ -1.66
ATM-217ENST00000531957 ZMYM3Q14202 1370 aa4.7□□□□□ -1.66
ATM-217ENST00000531957 NEMP1O14524 444 aa4.7□□□□□ -1.66
ATM-217ENST00000531957 FOXN1O15353 648 aa4.7□□□□□ -1.66
ATM-217ENST00000531957 BPIP17213 487 aa4.7□□□□□ -1.66
ATM-217ENST00000531957 APOBEC3AP31941 199 aaPredicted RBP4.7□□□□□ -1.66
ATM-217ENST00000531957 GZMKP49863 264 aa4.7□□□□□ -1.66
ATM-217ENST00000531957 GYS2P54840 703 aa4.7□□□□□ -1.66
ATM-217ENST00000531957 STRN3Q13033 797 aa4.7□□□□□ -1.66
ATM-217ENST00000531957 MRPL49Q13405 166 aaKnown RBP4.7□□□□□ -1.66
ATM-217ENST00000531957 NAIF1Q69YI7 327 aaPredicted RBP4.7□□□□□ -1.66
ATM-217ENST00000531957 VRK3Q8IV63 474 aa4.7□□□□□ -1.66
ATM-217ENST00000531957 OR52N2Q8NGI0 321 aa4.7□□□□□ -1.66
ATM-217ENST00000531957 OR14C36Q8NHC7 312 aa4.7□□□□□ -1.66
ATM-217ENST00000531957 HAS1Q92839 578 aa4.7□□□□□ -1.66
ATM-217ENST00000531957 TOPORSQ9NS56 1045 aaPredicted RBP4.7□□□□□ -1.66
ATM-217ENST00000531957 EIF2B4Q9UI10 523 aaKnown RBP4.7□□□□□ -1.66
ATM-217ENST00000531957 HDAC5Q9UQL6 1122 aa4.7□□□□□ -1.66
ATM-217ENST00000531957 TBX22Q9Y458 520 aa4.7□□□□□ -1.66
ATM-217ENST00000531957 RHOBTB3O94955 611 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 LTA4HP09960 611 aaKnown RBP4.69□□□□□ -1.66
ATM-217ENST00000531957 LMO1P25800 156 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 ZFP36P26651 326 aaKnown RBP4.69□□□□□ -1.66
ATM-217ENST00000531957 FAM189BP81408 668 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 VPS72Q15906 364 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 CCDC178Q5BJE1 867 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 ANKS6Q68DC2 871 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 STRA8Q7Z7C7 330 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 RNF180Q86T96 592 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 FAM83AQ86UY5 434 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 RASSF3Q86WH2 238 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 THNSL2Q86YJ6 484 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 CMIPQ8IY22 773 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 GLB1L3Q8NCI6 653 aaPredicted RBP4.69□□□□□ -1.66
ATM-217ENST00000531957 CLRN3Q8NCR9 226 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 MDM1Q8TC05 714 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 EAF2Q96CJ1 260 aaPredicted RBP4.69□□□□□ -1.66
ATM-217ENST00000531957 FAM193BQ96PV7 902 aaPredicted RBP4.69□□□□□ -1.66
ATM-217ENST00000531957 SPON1Q9HCB6 807 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 KCNG1Q9UIX4 513 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.69□□□□□ -1.66
ATM-217ENST00000531957 MAPRE3Q9UPY8 281 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 CDY2AQ9Y6F7 541 aa4.69□□□□□ -1.66
ATM-217ENST00000531957 AHRRA9YTQ3 701 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 LEFTY2O00292 366 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 ITGA10O75578 1167 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 GYPEP15421 78 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 BMP5P22003 454 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 CCT2P78371 535 aaKnown RBP4.68□□□□□ -1.66
ATM-217ENST00000531957 APBA1Q02410 837 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 CSRP2Q16527 193 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 MBNL2Q5VZF2 373 aaKnown RBP4.68□□□□□ -1.66
ATM-217ENST00000531957 LAIR1Q6GTX8 287 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 RHOUQ7L0Q8 258 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 SYNE4Q8N205 404 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 LILRA3Q8N6C8 439 aaPredicted RBP4.68□□□□□ -1.66
ATM-217ENST00000531957 PROKR1Q8TCW9 393 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 CDC5LQ99459 802 aaKnown RBP4.68□□□□□ -1.66
ATM-217ENST00000531957 NDC1Q9BTX1 674 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 WNT8AQ9H1J5 351 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 KCNH6Q9H252 994 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 TRPM5Q9NZQ8 1165 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 USP35Q9P2H5 1018 aa4.68□□□□□ -1.66
ATM-217ENST00000531957 PRR5-ARHGAP8B1AHC4 643 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms