RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 CDR2LQ86X02 465 aaPredicted RBP10.07□□□□□ -0.8
USF1-210ENST00000531842 COLGALT2Q8IYK4 626 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 CMASQ8NFW8 434 aaPredicted RBP10.07□□□□□ -0.8
USF1-210ENST00000531842 SLC5A5Q92911 643 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 TMEM143Q96AN5 459 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 CPB2Q96IY4 423 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 FAM193BQ96PV7 902 aaPredicted RBP10.07□□□□□ -0.8
USF1-210ENST00000531842 GAD1Q99259 594 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 GPR62Q9BZJ7 368 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 ZMYND12Q9H0C1 365 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 NT5C3AQ9H0P0 336 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 PIDD1Q9HB75 910 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 PARD6AQ9NPB6 346 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 SPATA6Q9NWH7 488 aaPredicted RBP10.07□□□□□ -0.8
USF1-210ENST00000531842 VPS54Q9P1Q0 977 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 WRAP73Q9P2S5 460 aaPredicted RBP10.07□□□□□ -0.8
USF1-210ENST00000531842 TICRRQ7Z2Z1 1910 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 ANHXE9PGG2 379 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 EML1O00423 815 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 GAS2O43903 313 aaKnown RBP10.06□□□□□ -0.8
USF1-210ENST00000531842 ZNF623O75123 536 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 PSMD10O75832 226 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 EFEMP2O95967 443 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 IGFBP6P24592 240 aaPredicted RBP10.06□□□□□ -0.8
USF1-210ENST00000531842 CIITAP33076 1130 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 MLH1P40692 756 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 UBXN2BQ14CS0 331 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 VARS2Q5ST30 1063 aaKnown RBP10.06□□□□□ -0.8
USF1-210ENST00000531842 GRASPQ7Z6J2 395 aaPredicted RBP10.06□□□□□ -0.8
USF1-210ENST00000531842 MRPL10Q7Z7H8 261 aaKnown RBP10.06□□□□□ -0.8
USF1-210ENST00000531842 RNF168Q8IYW5 571 aaPredicted RBP10.06□□□□□ -0.8
USF1-210ENST00000531842 ITFG1Q8TB96 612 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 URGCPQ8TCY9 931 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 HASPINQ8TF76 798 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 KXD1Q9BQD3 176 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 PAAF1Q9BRP4 392 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 TRAIPQ9BWF2 469 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 TEKT3Q9BXF9 490 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 NIFKQ9BYG3 293 aaKnown RBP10.06□□□□□ -0.8
USF1-210ENST00000531842 CXCL16Q9H2A7 254 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 AGPAT5Q9NUQ2 364 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 HCFC1R1Q9NWW0 138 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 NCDNQ9UBB6 729 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 BAHCC1Q9P281 2608 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 F5P12259 2224 aa10.06□□□□□ -0.8
USF1-210ENST00000531842 PDCD11Q14690 1871 aaKnown RBP10.05□□□□□ -0.8
USF1-210ENST00000531842 ARL5CA6NH57 179 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 NRG2O14511 850 aaPredicted RBP10.05□□□□□ -0.8
USF1-210ENST00000531842 CCL16O15467 120 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 ADAM12O43184 909 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 KINO60870 393 aaKnown RBP10.05□□□□□ -0.8
USF1-210ENST00000531842 MAFO75444 373 aaPredicted RBP10.05□□□□□ -0.8
USF1-210ENST00000531842 ADH1AP07327 375 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 HOXC13P31276 330 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 XKR3Q5GH77 459 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 PHLDB3Q6NSJ2 640 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 FAM43BQ6ZT52 329 aaPredicted RBP10.05□□□□□ -0.8
USF1-210ENST00000531842 PRPF31Q8WWY3 499 aaKnown RBP10.05□□□□□ -0.8
USF1-210ENST00000531842 ING5Q8WYH8 240 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 SEMA4AQ9H3S1 761 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 RXFP1Q9HBX9 757 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 NCOA5Q9HCD5 579 aaKnown RBP10.05□□□□□ -0.8
USF1-210ENST00000531842 C6orf50Q9HD87 102 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 KLK14Q9P0G3 267 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 IPPQ9Y573 584 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 COL4A3BPQ9Y5P4 624 aa10.05□□□□□ -0.8
USF1-210ENST00000531842 CEP295Q9C0D2 2601 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 ESYT2A0FGR8 921 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 SHISA7A6NL88 538 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 FAM170BA6NMN3 283 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 hCG_1984214I3L0E3 225 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 ITGA4P13612 1032 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 TGM1P22735 817 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 FSHRP23945 695 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 AKAP5P24588 427 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 DNM2P50570 870 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 RAB27AP51159 221 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 JAK3P52333 1124 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 STARD6P59095 220 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 DSG1Q02413 1049 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 RTP2Q5QGT7 225 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 LILRA6Q6PI73 481 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 ZC3H14Q6PJT7 736 aaKnown RBP10.04□□□□□ -0.8
USF1-210ENST00000531842 B3GNT9Q6UX72 402 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 DHX32Q7L7V1 743 aaKnown RBP10.04□□□□□ -0.8
USF1-210ENST00000531842 ZNF410Q86VK4 478 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 ZNF713Q8N859 430 aaPredicted RBP10.04□□□□□ -0.8
USF1-210ENST00000531842 TBCKQ8TEA7 893 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 STAMQ92783 540 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 PGBD4Q96DM1 585 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 AIFM3Q96NN9 605 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 RIT2Q99578 217 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 TMEM175Q9BSA9 504 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 PRKD2Q9BZL6 878 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 PLA2G2FQ9BZM2 168 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 NXF3Q9H4D5 531 aaKnown RBP10.04□□□□□ -0.8
USF1-210ENST00000531842 SLC2A4RGQ9NR83 387 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 USP18Q9UMW8 372 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 POLIQ9UNA4 740 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 SMG5Q9UPR3 1016 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms