RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 PPP4R3CPQ6ZMV5 832 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 LRRC8DQ7L1W4 858 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 FAM228AQ86W67 206 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 POMGNT1Q8WZA1 660 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 PPP1R12CQ9BZL4 782 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 HIPK3Q9H422 1215 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 TMEM39AQ9NV64 488 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 UMODL1Q5DID0 1318 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 SELPP16109 830 aa20.83■□□□□ 0.93
SMPD1-205ENST00000531303 ARF4P18085 180 aaPredicted RBP20.83■□□□□ 0.93
SMPD1-205ENST00000531303 ADSSP30520 456 aa20.83■□□□□ 0.93
SMPD1-205ENST00000531303 FKBP3Q00688 224 aaKnown RBP20.83■□□□□ 0.93
SMPD1-205ENST00000531303 NCBP1Q09161 790 aaKnown RBP20.83■□□□□ 0.93
SMPD1-205ENST00000531303 EDRF1Q3B7T1 1238 aa20.83■□□□□ 0.93
SMPD1-205ENST00000531303 FBXO47Q5MNV8 452 aa20.83■□□□□ 0.93
SMPD1-205ENST00000531303 EEF1DP3Q658K8 133 aa20.83■□□□□ 0.93
SMPD1-205ENST00000531303 CEP135Q66GS9 1140 aa20.83■□□□□ 0.93
SMPD1-205ENST00000531303 ZPBP2Q6X784 338 aa20.83■□□□□ 0.93
SMPD1-205ENST00000531303 UBE2Q1Q7Z7E8 422 aa20.83■□□□□ 0.93
SMPD1-205ENST00000531303 PRIMPOLQ96LW4 560 aa20.83■□□□□ 0.93
SMPD1-205ENST00000531303 NOC4LQ9BVI4 516 aaKnown RBP20.83■□□□□ 0.93
SMPD1-205ENST00000531303 AGO3Q9H9G7 860 aaKnown RBP20.83■□□□□ 0.93
SMPD1-205ENST00000531303 CNTNAP2Q9UHC6 1331 aa20.83■□□□□ 0.92
SMPD1-205ENST00000531303 GOLGA8IPA6NC78 632 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 GOLGA8JA6NMD2 632 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 CETN3O15182 167 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 PIGRP01833 764 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 CLTBP09497 229 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 RPL13P26373 211 aaKnown RBP20.82■□□□□ 0.92
SMPD1-205ENST00000531303 CD52P31358 61 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 GSE1Q14687 1217 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 LPIN1Q14693 890 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 TRAF7Q6Q0C0 670 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 LRRC55Q6ZSA7 311 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 TSHZ1Q6ZSZ6 1077 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 ZSWIM2Q8NEG5 633 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 SAAL1Q96ER3 474 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 PRDM5Q9NQX1 630 aaPredicted RBP20.82■□□□□ 0.92
SMPD1-205ENST00000531303 HSPBP1Q9NZL4 362 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 ST3GAL5Q9UNP4 418 aa20.82■□□□□ 0.92
SMPD1-205ENST00000531303 GOLGA6L3A6NEY3 463 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 CLDN3O15551 220 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 EXOC3O60645 756 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 TOM1L1O75674 476 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 CYP2C18P33260 490 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 CASP4P49662 377 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 CCL23P55773 120 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 SNRPFP62306 86 aaKnown RBP20.81■□□□□ 0.92
SMPD1-205ENST00000531303 TPM4P67936 248 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 MBTPS1Q14703 1052 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 SLFN12LQ6IEE8 588 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 RDH13Q8NBN7 331 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 MSTO1Q9BUK6 570 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 HAPLN2Q9GZV7 340 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 PDZD7Q9H5P4 517 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 CGNQ9P2M7 1197 aaKnown RBP20.81■□□□□ 0.92
SMPD1-205ENST00000531303 PIN4Q9Y237 131 aaKnown RBP20.81■□□□□ 0.92
SMPD1-205ENST00000531303 FGFR1OPO95684 399 aaKnown RBP20.81■□□□□ 0.92
SMPD1-205ENST00000531303 CDK11BP21127 795 aaKnown RBP20.81■□□□□ 0.92
SMPD1-205ENST00000531303 HOXA11P31270 313 aaPredicted RBP20.81■□□□□ 0.92
SMPD1-205ENST00000531303 RBL2Q08999 1139 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 PAK2Q13177 524 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 ZNF568Q3ZCX4 644 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 MPZL3Q6UWV2 235 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 SCLYQ96I15 445 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 HSD3B7Q9H2F3 369 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 THAP9Q9H5L6 903 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 AGPAT5Q9NUQ2 364 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 TBX21Q9UL17 535 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 PADI3Q9ULW8 664 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 TNFSF13BQ9Y275 285 aa20.81■□□□□ 0.92
SMPD1-205ENST00000531303 SCN5AQ14524 2016 aa20.8■□□□□ 0.92
SMPD1-205ENST00000531303 PITPNM1O00562 1244 aa20.8■□□□□ 0.92
SMPD1-205ENST00000531303 GPR182O15218 404 aa20.8■□□□□ 0.92
SMPD1-205ENST00000531303 GARTP22102 1010 aa20.8■□□□□ 0.92
SMPD1-205ENST00000531303 PLCB2Q00722 1185 aa20.8■□□□□ 0.92
SMPD1-205ENST00000531303 PCBP1Q15365 356 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMPD1-205ENST00000531303 SEZ6Q53EL9 994 aa20.8■□□□□ 0.92
SMPD1-205ENST00000531303 FOXR2Q6PJQ5 311 aa20.8■□□□□ 0.92
SMPD1-205ENST00000531303 XXYLT1Q8NBI6 393 aa20.8■□□□□ 0.92
SMPD1-205ENST00000531303 CEP63Q96MT8 703 aa20.8■□□□□ 0.92
SMPD1-205ENST00000531303 DMAC2Q9NW81 257 aa20.8■□□□□ 0.92
SMPD1-205ENST00000531303 MAGEC2Q9UBF1 373 aaPredicted RBP20.8■□□□□ 0.92
SMPD1-205ENST00000531303 AGO2Q9UKV8 859 aaKnown RBP20.8■□□□□ 0.92
SMPD1-205ENST00000531303 STYXL1Q9Y6J8 313 aa20.8■□□□□ 0.92
SMPD1-205ENST00000531303 A0A0B4J269 797 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 A0A1B0GUA9 196 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 N4BP3O15049 544 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 ATP1A3P13637 1013 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 NOLC1Q14978 699 aaKnown RBP eCLIP20.79■□□□□ 0.92
SMPD1-205ENST00000531303 NFIL3Q16649 462 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 CCDC40Q4G0X9 1142 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 NOTUMQ6P988 496 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 IRF2BP1Q8IU81 584 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 C12orf56Q8IXR9 622 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 FAM213AQ9BRX8 229 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 CDT1Q9H211 546 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 PTPRHQ9HD43 1115 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 ERVK-5Q9HDB9 667 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 PCDH10Q9P2E7 1040 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms