RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 MUTP22033 750 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 SERPINB3P29508 390 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 CEBPAP49715 358 aaPredicted RBP8.71□□□□□ -1.02
CSDE1-214ENST00000530886 RNASE9P60153 205 aaKnown RBP8.71□□□□□ -1.02
CSDE1-214ENST00000530886 XIAPP98170 497 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 DR1Q01658 176 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 KIAA1755Q5JYT7 1200 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 BARGINQ6ZT62 677 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 TMTC3Q6ZXV5 915 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 SYCE1Q8N0S2 351 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 LSM14AQ8ND56 463 aaKnown RBP8.71□□□□□ -1.02
CSDE1-214ENST00000530886 ZNF496Q96IT1 587 aaPredicted RBP8.71□□□□□ -1.02
CSDE1-214ENST00000530886 CADM1Q9BY67 442 aaKnown RBP8.71□□□□□ -1.02
CSDE1-214ENST00000530886 TAOK3Q9H2K8 898 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 TMEM60Q9H2L4 133 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 CNNM2Q9H8M5 875 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 PIH1D3Q9NQM4 214 aaKnown RBP8.71□□□□□ -1.02
CSDE1-214ENST00000530886 FAM207AQ9NSI2 230 aaPredicted RBP8.71□□□□□ -1.02
CSDE1-214ENST00000530886 NLRP2Q9NX02 1062 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 LGALS13Q9UHV8 139 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 COL4A1P02462 1669 aa8.71□□□□□ -1.02
CSDE1-214ENST00000530886 P4HA2O15460 535 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 CCDC22O60826 627 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 KRT36O76013 467 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 MYL6BP14649 208 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 CDR2Q01850 454 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 SF3A3Q12874 501 aaKnown RBP eCLIP8.7□□□□□ -1.02
CSDE1-214ENST00000530886 UBAP2Q5T6F2 1119 aaKnown RBP8.7□□□□□ -1.02
CSDE1-214ENST00000530886 BORAQ6PGQ7 559 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 ARHGEF2Q92974 986 aaKnown RBP8.7□□□□□ -1.02
CSDE1-214ENST00000530886 CRAMP1Q96RY5 1269 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 EIF2AQ9BY44 585 aaKnown RBP8.7□□□□□ -1.02
CSDE1-214ENST00000530886 CYLDQ9NQC7 956 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 RASAL2Q9UJF2 1139 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 PCDHA3Q9Y5H8 950 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 FADS3Q9Y5Q0 445 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 KAT6BQ8WYB5 2073 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 PHLPP1O60346 1717 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 TLDC2A0PJX2 215 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 A6NJR5 290 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 VILLO15195 856 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 CBFA2T3O75081 653 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 SERPINB7O75635 380 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 ETS2P15036 469 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 CERKLQ49MI3 558 aaPredicted RBP8.7□□□□□ -1.02
CSDE1-214ENST00000530886 TPCN2Q8NHX9 752 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 C10orf82Q8WW14 230 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 BTBD10Q9BSF8 475 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 PITPNM3Q9BZ71 974 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 CELF4Q9BZC1 486 aaKnown RBP8.7□□□□□ -1.02
CSDE1-214ENST00000530886 CCSER1Q9C0I3 900 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 NACA2Q9H009 215 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 MTRF1LQ9UGC7 380 aaKnown RBP8.7□□□□□ -1.02
CSDE1-214ENST00000530886 SAP30BPQ9UHR5 308 aaKnown RBP8.7□□□□□ -1.02
CSDE1-214ENST00000530886 TNRQ92752 1358 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 ATP5J2-PTCD1G3V325 749 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 PTCD1O75127 700 aaKnown RBP8.7□□□□□ -1.02
CSDE1-214ENST00000530886 ALAS1P13196 640 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 FUT4P22083 530 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 GRIA2P42262 883 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 RAP1GDS1P52306 607 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 OLFML2BQ68BL8 750 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 THOC7Q6I9Y2 204 aaKnown RBP8.7□□□□□ -1.02
CSDE1-214ENST00000530886 RFWD3Q6PCD5 774 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 FANCBQ8NB91 859 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 PRICKLE1Q96MT3 831 aaPredicted RBP8.7□□□□□ -1.02
CSDE1-214ENST00000530886 C7orf25Q9BPX7 421 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 SIKE1Q9BRV8 207 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 TRIM51Q9BSJ1 452 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 RBM38Q9H0Z9 239 aaKnown RBP8.7□□□□□ -1.02
CSDE1-214ENST00000530886 SEMA4AQ9H3S1 761 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 PLK2Q9NYY3 685 aa8.7□□□□□ -1.02
CSDE1-214ENST00000530886 RBBP6Q7Z6E9 1792 aaKnown RBP8.69□□□□□ -1.02
CSDE1-214ENST00000530886 CDK5RAP2Q96SN8 1893 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 MYPNQ86TC9 1320 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 PODXLO00592 558 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 C2CD2LO14523 706 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 GSC2O15499 205 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 PDGFRBP09619 1106 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 ZCCHC18P0CG32 403 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 PLCB3Q01970 1234 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 TBL3Q12788 808 aaKnown RBP8.69□□□□□ -1.02
CSDE1-214ENST00000530886 MAPK7Q13164 816 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 SLC39A6Q13433 755 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 LRRC14Q15048 493 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 SYCP2LQ5T4T6 812 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 DHRS4L2Q6PKH6 230 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 DSTYKQ6XUX3 929 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 PTCD3Q96EY7 689 aaKnown RBP8.69□□□□□ -1.02
CSDE1-214ENST00000530886 NT5C3AQ9H0P0 336 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 SEMA6BQ9H3T3 888 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 MMRN2Q9H8L6 949 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 C17orf75Q9HAS0 396 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 TBC1D7Q9P0N9 293 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 A0A087X0T9 212 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 GSG1L2A8MUP6 293 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 PHF2O75151 1096 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 CSF1RP07333 972 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 FAM228BP0C875 321 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 STX2P32856 288 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms