RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 HGFACQ04756 655 aa9.57□□□□□ -0.88
CSDE1-213ENST00000530784 ZNF772Q68DY9 489 aaPredicted RBP9.57□□□□□ -0.88
CSDE1-213ENST00000530784 KIAA1841Q6NSI8 718 aa9.57□□□□□ -0.88
CSDE1-213ENST00000530784 KLHDC10Q6PID8 442 aa9.57□□□□□ -0.88
CSDE1-213ENST00000530784 Q8TCH9 128 aa9.57□□□□□ -0.88
CSDE1-213ENST00000530784 WWC2-AS2Q96NR7 200 aa9.57□□□□□ -0.88
CSDE1-213ENST00000530784 KRTAP4-9Q9BYQ8 210 aa9.57□□□□□ -0.88
CSDE1-213ENST00000530784 MTG2Q9H4K7 406 aa9.57□□□□□ -0.88
CSDE1-213ENST00000530784 MSRAQ9UJ68 235 aa9.57□□□□□ -0.88
CSDE1-213ENST00000530784 ZFR2Q9UPR6 939 aaKnown RBP9.57□□□□□ -0.88
CSDE1-213ENST00000530784 CTDP1Q9Y5B0 961 aaPredicted RBP9.57□□□□□ -0.88
CSDE1-213ENST00000530784 MST1RQ04912 1400 aa9.56□□□□□ -0.88
CSDE1-213ENST00000530784 NAIPQ13075 1403 aa9.56□□□□□ -0.88
CSDE1-213ENST00000530784 ADGRL3Q9HAR2 1447 aa9.56□□□□□ -0.88
CSDE1-213ENST00000530784 RRBP1Q9P2E9 1410 aaKnown RBP9.56□□□□□ -0.88
CSDE1-213ENST00000530784 ZNF623O75123 536 aa9.56□□□□□ -0.88
CSDE1-213ENST00000530784 GPR158Q5T848 1215 aa9.56□□□□□ -0.88
CSDE1-213ENST00000530784 DDX46Q7L014 1031 aaKnown RBP9.56□□□□□ -0.88
CSDE1-213ENST00000530784 BMP8AQ7Z5Y6 402 aa9.56□□□□□ -0.88
CSDE1-213ENST00000530784 C11orf74Q86VG3 221 aa9.56□□□□□ -0.88
CSDE1-213ENST00000530784 DYDC2Q96IM9 177 aa9.56□□□□□ -0.88
CSDE1-213ENST00000530784 EMC7Q9NPA0 242 aa9.56□□□□□ -0.88
CSDE1-213ENST00000530784 ZNF20P17024 532 aa9.55□□□□□ -0.88
CSDE1-213ENST00000530784 MASP1P48740 699 aa9.55□□□□□ -0.88
CSDE1-213ENST00000530784 PHC1P78364 1004 aa9.55□□□□□ -0.88
CSDE1-213ENST00000530784 DHCR24Q15392 516 aa9.55□□□□□ -0.88
CSDE1-213ENST00000530784 TERF2Q15554 542 aa9.55□□□□□ -0.88
CSDE1-213ENST00000530784 ZNF610Q8N9Z0 462 aa9.55□□□□□ -0.88
CSDE1-213ENST00000530784 NKD2Q969F2 451 aaPredicted RBP9.55□□□□□ -0.88
CSDE1-213ENST00000530784 PITHD1Q9GZP4 211 aaPredicted RBP9.55□□□□□ -0.88
CSDE1-213ENST00000530784 DNAI1Q9UI46 699 aa9.55□□□□□ -0.88
CSDE1-213ENST00000530784 SETD5Q9C0A6 1442 aa9.55□□□□□ -0.88
CSDE1-213ENST00000530784 NHSL1Q5SYE7 1610 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 A0A0A6YYJ9 748 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 H2AFYO75367 372 aaKnown RBP9.54□□□□□ -0.88
CSDE1-213ENST00000530784 BPIP17213 487 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 LSP1P33241 339 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 STAT3P40763 770 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 SESN2P58004 480 aaPredicted RBP9.54□□□□□ -0.88
CSDE1-213ENST00000530784 DUSP8Q13202 625 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 ACAP1Q15027 740 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 ZNF585AQ6P3V2 769 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 STRA8Q7Z7C7 330 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 FUKQ8N0W3 1084 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 DVL3Q92997 716 aaPredicted RBP9.54□□□□□ -0.88
CSDE1-213ENST00000530784 USP7Q93009 1102 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 GFM2Q969S9 779 aaKnown RBP9.54□□□□□ -0.88
CSDE1-213ENST00000530784 PLA2G12BQ9BX93 195 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 C1QTNF3Q9BXJ4 246 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 KRTAP9-3Q9BYQ3 159 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 HAPLN2Q9GZV7 340 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 DEF6Q9H4E7 631 aa9.54□□□□□ -0.88
CSDE1-213ENST00000530784 POLR3BQ9NW08 1133 aaPredicted RBP9.54□□□□□ -0.88
CSDE1-213ENST00000530784 USP36Q9P275 1121 aaKnown RBP9.54□□□□□ -0.88
CSDE1-213ENST00000530784 NALCNQ8IZF0 1738 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 C2orf78A6NCI8 922 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 NEMP1O14524 444 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 OPHN1O60890 802 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 ID4P47928 161 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 ATP2C1P98194 919 aaPredicted RBP9.53□□□□□ -0.88
CSDE1-213ENST00000530784 STRN3Q13033 797 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 ATP13A4Q4VNC1 1196 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 BROXQ5VW32 411 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 ESPNLQ6ZVH7 1005 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 WDR92Q96MX6 357 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 OR14A2Q96R54 314 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 GPR20Q99678 358 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 KLC2Q9H0B6 622 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 CAAP1Q9H8G2 361 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 HFM1A2PYH4 1435 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 PTCH1Q13635 1447 aa9.53□□□□□ -0.88
CSDE1-213ENST00000530784 CLSTN1O94985 981 aa9.52□□□□□ -0.89
CSDE1-213ENST00000530784 DDB1Q16531 1140 aa9.52□□□□□ -0.89
CSDE1-213ENST00000530784 ZBTB41Q5SVQ8 909 aa9.52□□□□□ -0.89
CSDE1-213ENST00000530784 GPR135Q8IZ08 494 aa9.52□□□□□ -0.89
CSDE1-213ENST00000530784 SLC5A5Q92911 643 aa9.52□□□□□ -0.89
CSDE1-213ENST00000530784 LRRC59Q96AG4 307 aaKnown RBP9.52□□□□□ -0.89
CSDE1-213ENST00000530784 RBM8AQ9Y5S9 174 aaKnown RBP9.52□□□□□ -0.89
CSDE1-213ENST00000530784 KIF1BO60333 1816 aa9.52□□□□□ -0.89
CSDE1-213ENST00000530784 SLC26A4O43511 780 aa9.51□□□□□ -0.89
CSDE1-213ENST00000530784 RAD17O75943 681 aa9.51□□□□□ -0.89
CSDE1-213ENST00000530784 PCDH8O95206 1070 aa9.51□□□□□ -0.89
CSDE1-213ENST00000530784 HNRNPLP14866 589 aaKnown RBP eCLIP9.51□□□□□ -0.89
CSDE1-213ENST00000530784 ADCY7P51828 1080 aa9.51□□□□□ -0.89
CSDE1-213ENST00000530784 GCDHQ92947 438 aaPredicted RBP9.51□□□□□ -0.89
CSDE1-213ENST00000530784 LPPQ93052 612 aa9.51□□□□□ -0.89
CSDE1-213ENST00000530784 NOL10Q9BSC4 688 aaKnown RBP9.51□□□□□ -0.89
CSDE1-213ENST00000530784 IFT22Q9H7X7 185 aa9.51□□□□□ -0.89
CSDE1-213ENST00000530784 AGO3Q9H9G7 860 aaKnown RBP9.51□□□□□ -0.89
CSDE1-213ENST00000530784 SYNPO2Q9UMS6 1093 aa9.51□□□□□ -0.89
CSDE1-213ENST00000530784 JAG2Q9Y219 1238 aa9.51□□□□□ -0.89
CSDE1-213ENST00000530784 C1orf167Q5SNV9 1468 aa9.51□□□□□ -0.89
CSDE1-213ENST00000530784 MYPNQ86TC9 1320 aa9.51□□□□□ -0.89
CSDE1-213ENST00000530784 PNPLA6Q8IY17 1366 aa9.5□□□□□ -0.89
CSDE1-213ENST00000530784 PRAG1Q86YV5 1406 aa9.5□□□□□ -0.89
CSDE1-213ENST00000530784 MAFGO15525 162 aa9.5□□□□□ -0.89
CSDE1-213ENST00000530784 SOX5P35711 763 aa9.5□□□□□ -0.89
CSDE1-213ENST00000530784 CDSNQ15517 529 aa9.5□□□□□ -0.89
CSDE1-213ENST00000530784 CHAC2Q8WUX2 184 aa9.5□□□□□ -0.89
CSDE1-213ENST00000530784 FERMT2Q96AC1 680 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms