RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 PHF20L1A8MW92 1017 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 TBX3O15119 743 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 KRT7P08729 469 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 EIF2AK2P19525 551 aaKnown RBP16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 QARSP47897 775 aaKnown RBP16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 VAMP7P51809 220 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 NCAPHQ15003 741 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 SLC27A3Q5K4L6 730 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 TRIM15Q9C019 465 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 KCND2Q9NZV8 630 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 A0A1W2PQJ5 194 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 CFAP69A5D8W1 941 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 FGFR4P22455 802 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 HOXD10P28358 340 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 SMARCA1P28370 1054 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 USP49Q70CQ1 688 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 ATP11CQ8NB49 1132 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 STAMBPL1Q96FJ0 436 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 C7orf25Q9BPX7 421 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 ANGPTL3Q9Y5C1 460 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 FAM205CA6NFA0 338 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 ZNF746Q6NUN9 644 aaPredicted RBP16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 SRBD1Q8N5C6 995 aaKnown RBP16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 RNF25Q96BH1 459 aaPredicted RBP16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 C11orf70Q9BRQ4 267 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 ZNF341Q9BYN7 854 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 POTEFA5A3E0 1075 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 USP17L15C9J2P7 530 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 USP17L13C9JLJ4 530 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 USP17L11C9JVI0 530 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 USP17L18D6R9N7 530 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 USP17L22D6RA61 530 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 USP17L17D6RBQ6 530 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 USP17L19D6RCP7 530 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 USP17L20D6RJB6 530 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 POTEIP0CG38 1075 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 USP17L24Q0WX57 530 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 MAPK6Q16659 721 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 TAF1BQ53T94 588 aaPredicted RBP16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 IZUMO3Q5VZ72 239 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 USP17L6PQ6QN14 398 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 POTEGQ6S5H5 508 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 POTEEQ6S8J3 1075 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 RHOT1Q8IXI2 618 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 VPS39Q96JC1 886 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 PNKPQ96T60 521 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 SMYD3Q9H7B4 428 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 TOPORSQ9NS56 1045 aaPredicted RBP16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 IQSEC2Q5JU85 1478 aa16.41■□□□□ 0.22
PCDHA4-203ENST00000530339 CIITAP33076 1130 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 PHKA2P46019 1235 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 EPHA7Q15375 998 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 FIS1Q9Y3D6 152 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 CLDN3O15551 220 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 DIAPH2O60879 1101 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 TDP2O95551 362 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 EYA4O95677 639 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 TAC1P20366 129 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 HNRNPH1P31943 449 aaKnown RBP16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 CARSP49589 748 aaKnown RBP16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 PSMC5P62195 406 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 ANO5Q75V66 913 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 TRMT10CQ7L0Y3 403 aaKnown RBP16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 FGD4Q96M96 766 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 TAF6LQ9Y6J9 622 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 ESYT2A0FGR8 921 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 SLC1A1P43005 524 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 GPS1Q13098 491 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 ZBED8Q8IZ13 594 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 SUFUQ9UMX1 484 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 L1RE1Q9UN81 338 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 SPDYE16A6NNV3 312 aaPredicted RBP16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 NFKBIAP25963 317 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 KRT17Q04695 432 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 PDIA2Q13087 525 aaKnown RBP16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 PTGISQ16647 500 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
PCDHA4-203ENST00000530339 GOLGA8MH3BSY2 632 aa16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 CDH16O75309 829 aa16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 UBE4BO95155 1302 aa16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 CASP2P42575 452 aa16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 SEC24CP53992 1094 aa16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 EPHB1P54762 984 aa16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 ANTXR2P58335 489 aa16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 C12orf60Q5U649 245 aa16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 RGS9BPQ6ZS82 235 aa16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 ZBTB33Q86T24 672 aa16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 AGGF1Q8N302 714 aaeCLIP16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 HSPH1Q92598 858 aa16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 GCNAQ96QF7 691 aa16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 RMDN3Q96TC7 470 aa16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.39■□□□□ 0.22
PCDHA4-203ENST00000530339 CCDC22O60826 627 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 CHEK2O96017 543 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 IRX1P78414 480 aaPredicted RBP16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 TRPM8Q7Z2W7 1104 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 C1orf54Q8WWF1 131 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 KPNA7A9QM74 516 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 CCND1P24385 295 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 EEF1DP29692 281 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms