RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 CCND2P30279 289 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 ALDH3A1P30838 453 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 MAP2K2P36507 400 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 CLNS1AP54105 237 aaKnown RBP13.23□□□□□ -0.29
SCN3B-206ENST00000530277 SLC29A2Q14542 456 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 ZRSR2Q15696 482 aaKnown RBP13.23□□□□□ -0.29
SCN3B-206ENST00000530277 KYNUQ16719 465 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 GLE1Q53GS7 698 aaKnown RBP13.23□□□□□ -0.29
SCN3B-206ENST00000530277 APBB1IPQ7Z5R6 666 aaPredicted RBP13.23□□□□□ -0.29
SCN3B-206ENST00000530277 RHPN2Q8IUC4 686 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 FBXO25Q8TCJ0 367 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 LRRC15Q8TF66 581 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 TRIM7Q9C029 511 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 AS3MTQ9HBK9 375 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 PPP1R9AQ9ULJ8 1098 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 RNF8O76064 485 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 TNNC2P02585 160 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 ATP2A2P16615 1042 aaKnown RBP13.23□□□□□ -0.29
SCN3B-206ENST00000530277 ATP5DP30049 168 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 DLG4P78352 724 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 SMTNL2Q2TAL5 461 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 LRRC71Q8N4P6 559 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 RNF34Q969K3 372 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 RILPQ96NA2 401 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 KLF6Q99612 283 aaPredicted RBP13.23□□□□□ -0.29
SCN3B-206ENST00000530277 TARS2Q9BW92 718 aaKnown RBP13.23□□□□□ -0.29
SCN3B-206ENST00000530277 FAM198AQ9UFP1 575 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 FEM1BQ9UK73 627 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 GRAP2O75791 330 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 GJB6O95452 261 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 PSAPP07602 524 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 CNGA1P29973 690 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 MAGEA9P43362 315 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 PSMC5P62195 406 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 PPP2R2AP63151 447 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 WDR93Q6P2C0 686 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 ANKMY2Q8IV38 441 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 CCDC33Q8N5R6 958 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 GINM1Q9NU53 330 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 RBAKQ9NYW8 714 aaPredicted RBP13.22□□□□□ -0.29
SCN3B-206ENST00000530277 HERC5Q9UII4 1024 aaKnown RBP13.22□□□□□ -0.29
SCN3B-206ENST00000530277 INTUQ9ULD6 942 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 HEY1Q9Y5J3 304 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 GMNCA6NCL1 334 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 H0Y3Z8 333 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 NR3C2P08235 984 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 WEE2P0C1S8 567 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 KRT17Q04695 432 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 ICE2Q659A1 982 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 SLC47A2Q86VL8 602 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 SLC35C1Q96A29 364 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 KLHL29Q96CT2 875 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 OTUD5Q96G74 571 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 MYCBPQ99417 103 aaPredicted RBP13.22□□□□□ -0.29
SCN3B-206ENST00000530277 PCDHA10Q9Y5I2 948 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 MEIS2O14770 477 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 EIF3HO15372 352 aaKnown RBP eCLIP13.22□□□□□ -0.29
SCN3B-206ENST00000530277 SLITRK3O94933 977 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 PCK1P35558 622 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 OR6B2Q6IFH4 312 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 MMS22LQ6ZRQ5 1243 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 MICALL2Q8IY33 904 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 MMGT1Q8N4V1 131 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 ZDHHC15Q96MV8 337 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 EDEM3Q9BZQ6 932 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 NRBP2Q9NSY0 501 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.22□□□□□ -0.29
SCN3B-206ENST00000530277 DDX3XO00571 662 aaKnown RBP eCLIP13.22□□□□□ -0.29
SCN3B-206ENST00000530277 DPEP1P16444 411 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 GNA15P30679 374 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 ORC2Q13416 577 aaPredicted RBP13.22□□□□□ -0.29
SCN3B-206ENST00000530277 KIAA1755Q5JYT7 1200 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 ZC3H18Q86VM9 953 aaKnown RBP13.22□□□□□ -0.29
SCN3B-206ENST00000530277 JAMLQ86YT9 394 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 TAS1R2Q8TE23 839 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 ARHGEF26Q96DR7 871 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 DCTN4Q9UJW0 460 aa13.22□□□□□ -0.29
SCN3B-206ENST00000530277 SLIT3O75094 1523 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 A6NNZ2 444 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 BRAFP15056 766 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 ERVK-9P63128 1117 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 TUBB8Q3ZCM7 444 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 DALRD3Q5D0E6 543 aaKnown RBP13.21□□□□□ -0.29
SCN3B-206ENST00000530277 MIS18BP1Q6P0N0 1132 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 CCDC110Q8TBZ0 833 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 MICAL1Q8TDZ2 1067 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 MCUR1Q96AQ8 359 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 MXRA8Q9BRK3 442 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 RAB21Q9UL25 225 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 RASA4BC9J798 803 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 RASA4O43374 803 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 PIAS1O75925 651 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 ATP11AP98196 1134 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 RCN2Q14257 317 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 MEA1Q16626 185 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 FAM182AQ5T1J6 154 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 ANKRD20A3Q5VUR7 823 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 PPP1R13LQ8WUF5 828 aa13.21□□□□□ -0.29
SCN3B-206ENST00000530277 HEXIM2Q96MH2 286 aaKnown RBP13.21□□□□□ -0.29
SCN3B-206ENST00000530277 PRMT1Q99873 361 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms