RNA–Protein interactions for RNA: ENST00000530120.5

CSRP1-213, Transcript of cysteine and glycine rich protein 1, human

TSL 4

Gene CSRP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSRP1-213	ENST00000530120	NLRP4	Q96MN2	994 aa		13.37	□□□□□ -0.27
CSRP1-213	ENST00000530120	ZBP1	Q9H171	429 aa		13.37	□□□□□ -0.27
CSRP1-213	ENST00000530120	ZSWIM4	Q9H7M6	989 aa		13.37	□□□□□ -0.27
CSRP1-213	ENST00000530120	IFT122	Q9HBG6	1241 aa		13.37	□□□□□ -0.27
CSRP1-213	ENST00000530120	UBN1	Q9NPG3	1134 aa		13.37	□□□□□ -0.27
CSRP1-213	ENST00000530120	KCNJ14	Q9UNX9	436 aa		13.37	□□□□□ -0.27
CSRP1-213	ENST00000530120	TMEM150B	A6NC51	233 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	EML1	O00423	815 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	MARCH6	O60337	910 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	CTSA	P10619	480 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	FGFR4	P22455	802 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	YWHAB	P31946	246 aa	Known RBP	13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	KRT2	P35908	639 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	RNASEL	Q05823	741 aa	Known RBP	13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	BECN1	Q14457	450 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	MXD4	Q14582	209 aa	Predicted RBP	13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	PLA2G4F	Q68DD2	849 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	PIK3AP1	Q6ZUJ8	805 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	DDX53	Q86TM3	631 aa	Known RBP	13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	CNNM3	Q8NE01	707 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	TBC1D13	Q9NVG8	400 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	DLL3	Q9NYJ7	618 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	KANSL3	Q9P2N6	904 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	WNT16	Q9UBV4	365 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	CA14	Q9ULX7	337 aa		13.36	□□□□□ -0.27
CSRP1-213	ENST00000530120	MIA3	Q5JRA6	1907 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	ZMYM2	Q9UBW7	1377 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	NARS	O43776	548 aa	Known RBP	13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	CSDE1	O75534	798 aa	Known RBP	13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	LYPLA2	O95372	231 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	AXL	P30530	894 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	GBP2	P32456	591 aa	Predicted RBP	13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	DEK	P35659	375 aa	Known RBP	13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	POU5F1B	Q06416	359 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	SPIRE1	Q08AE8	756 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	EMC2	Q15006	297 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	POTED	Q86YR6	584 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	SLC22A17	Q8WUG5	538 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	STAM	Q92783	540 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	HAS1	Q92839	578 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	IGSF21	Q96ID5	467 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	TMEM175	Q9BSA9	504 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	EMILIN2	Q9BXX0	1053 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	TBC1D17	Q9HA65	648 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	ORC3	Q9UBD5	711 aa	Predicted RBP	13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	TPCN1	Q9ULQ1	816 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	PCDHB2	Q9Y5E7	798 aa		13.35	□□□□□ -0.27
CSRP1-213	ENST00000530120	CACNA1I	Q9P0X4	2223 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	ERLIN2	O94905	339 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	SP9	P0CG40	484 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	SDHB	P21912	280 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	KLRC2	P26717	231 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	NCBP1	Q09161	790 aa	Known RBP	13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	LAMTOR4	Q0VGL1	99 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	TFDP1	Q14186	410 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	ELMSAN1	Q6PJG2	1045 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	MRPL10	Q7Z7H8	261 aa	Known RBP	13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	DCLK2	Q8N568	766 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	PRPF31	Q8WWY3	499 aa	Known RBP	13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	GTF3C6	Q969F1	213 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	MTR	Q99707	1265 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	SH2D3A	Q9BRG2	576 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	LARP6	Q9BRS8	491 aa	Known RBP	13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	RSAD1	Q9HA92	442 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	NCDN	Q9UBB6	729 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	ARID2	Q68CP9	1835 aa		13.34	□□□□□ -0.27
CSRP1-213	ENST00000530120	MAP1B	P46821	2468 aa	Known RBP	13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	KRBA1	A5PL33	1030 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	INPPL1	O15357	1258 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	KIN	O60870	393 aa	Known RBP	13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	OFD1	O75665	1012 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	DGAT1	O75907	488 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	DCN	P07585	359 aa	Known RBP	13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	GALT	P07902	379 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	NCL	P19338	710 aa	Known RBP	13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	AK2	P54819	239 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	NPEPPS	P55786	919 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	TRIM29	Q14134	588 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	NCAPH2	Q6IBW4	605 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	NOTUM	Q6P988	496 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	C15orf39	Q6ZRI6	1047 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	FERMT3	Q86UX7	667 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	KSR1	Q8IVT5	923 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	C1orf210	Q8IVY1	113 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	HACE1	Q8IYU2	909 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	RNF149	Q8NC42	400 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	TNFRSF25	Q93038	417 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	CCDC43	Q96MW1	224 aa	Known RBP	13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	NFKBIZ	Q9BYH8	718 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	NRDE2	Q9H7Z3	1164 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	ANKEF1	Q9NU02	776 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	SSX2IP	Q9Y2D8	614 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	INPP5F	Q9Y2H2	1132 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	SIT1	Q9Y3P8	196 aa		13.33	□□□□□ -0.28
CSRP1-213	ENST00000530120	NEMF	O60524	1076 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	CTDNEP1	O95476	244 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms