RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 C1RP00736 705 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 ITGA4P13612 1032 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 PDIA3P30101 505 aaKnown RBP17.95■□□□□ 0.46
COL16A1-216ENST00000529928 EVCP57679 992 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 CCT2P78371 535 aaKnown RBP17.95■□□□□ 0.46
COL16A1-216ENST00000529928 DSG1Q02413 1049 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 LAMTOR4Q0VGL1 99 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 PPP2R5CQ13362 524 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 PCBP1Q15365 356 aaKnown RBP eCLIP17.95■□□□□ 0.46
COL16A1-216ENST00000529928 KIAA0319Q5VV43 1072 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 ZC3H14Q6PJT7 736 aaKnown RBP17.95■□□□□ 0.46
COL16A1-216ENST00000529928 TAS1R1Q7RTX1 841 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 FAM177A1Q8N128 213 aaPredicted RBP17.95■□□□□ 0.46
COL16A1-216ENST00000529928 DAGLBQ8NCG7 672 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 SMG8Q8ND04 991 aaKnown RBP17.95■□□□□ 0.46
COL16A1-216ENST00000529928 TCP11Q8WWU5 503 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 TMEM143Q96AN5 459 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 MYADMQ96S97 322 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 PLEKHA4Q9H4M7 779 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 TBC1D17Q9HA65 648 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 NCOA5Q9HCD5 579 aaKnown RBP17.95■□□□□ 0.46
COL16A1-216ENST00000529928 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.95■□□□□ 0.46
COL16A1-216ENST00000529928 IPPQ9Y573 584 aa17.95■□□□□ 0.46
COL16A1-216ENST00000529928 ARL5CA6NH57 179 aa17.94■□□□□ 0.46
COL16A1-216ENST00000529928 M0R2N6 131 aa17.94■□□□□ 0.46
COL16A1-216ENST00000529928 EML1O00423 815 aa17.94■□□□□ 0.46
COL16A1-216ENST00000529928 ASAP2O43150 1006 aa17.94■□□□□ 0.46
COL16A1-216ENST00000529928 PAPLNO95428 1278 aa17.94■□□□□ 0.46
COL16A1-216ENST00000529928 P4HBP07237 508 aaKnown RBP17.94■□□□□ 0.46
COL16A1-216ENST00000529928 HSPA4P34932 840 aa17.94■□□□□ 0.46
COL16A1-216ENST00000529928 DSC1Q08554 894 aa17.94■□□□□ 0.46
COL16A1-216ENST00000529928 SSRP1Q08945 709 aaKnown RBP17.94■□□□□ 0.46
COL16A1-216ENST00000529928 GALNT17Q6IS24 598 aa17.94■□□□□ 0.46
COL16A1-216ENST00000529928 PHLDB3Q6NSJ2 640 aa17.94■□□□□ 0.46
COL16A1-216ENST00000529928 ZNF579Q8NAF0 562 aaKnown RBP17.94■□□□□ 0.46
COL16A1-216ENST00000529928 RNF149Q8NC42 400 aa17.94■□□□□ 0.46
COL16A1-216ENST00000529928 ZNF707Q96C28 371 aaPredicted RBP17.94■□□□□ 0.46
COL16A1-216ENST00000529928 FAM20AQ96MK3 541 aa17.94■□□□□ 0.46
COL16A1-216ENST00000529928 SLKQ9H2G2 1235 aaPredicted RBP17.94■□□□□ 0.46
COL16A1-216ENST00000529928 PIDD1Q9HB75 910 aa17.94■□□□□ 0.46
COL16A1-216ENST00000529928 ZDHHC7Q9NXF8 308 aa17.94■□□□□ 0.46
COL16A1-216ENST00000529928 DEXIO95424 95 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 MYBP10242 640 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 PSMA5P28066 241 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 AXLP30530 894 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 MLH1P40692 756 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 NCBP1Q09161 790 aaKnown RBP17.93■□□□□ 0.46
COL16A1-216ENST00000529928 NOTUMQ6P988 496 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 OTUD6AQ7L8S5 288 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 KRT25Q7Z3Z0 450 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 GPR65Q8IYL9 337 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 GPR152Q8TDT2 470 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 CCDC51Q96ER9 411 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 GAD1Q99259 594 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 ARHGEF3Q9NR81 526 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.93■□□□□ 0.46
COL16A1-216ENST00000529928 CHST7Q9NS84 486 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 VAV3Q9UKW4 847 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 SIT1Q9Y3P8 196 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 R4GN57 208 aa17.93■□□□□ 0.46
COL16A1-216ENST00000529928 SLC37A4O43826 429 aa17.92■□□□□ 0.46
COL16A1-216ENST00000529928 SPATA31D3P0C874 917 aa17.92■□□□□ 0.46
COL16A1-216ENST00000529928 LAMP2P13473 410 aa17.92■□□□□ 0.46
COL16A1-216ENST00000529928 YWHABP31946 246 aaKnown RBP17.92■□□□□ 0.46
COL16A1-216ENST00000529928 EMC2Q15006 297 aa17.92■□□□□ 0.46
COL16A1-216ENST00000529928 INF2Q27J81 1249 aa17.92■□□□□ 0.46
COL16A1-216ENST00000529928 SPECC1Q5M775 1068 aa17.92■□□□□ 0.46
COL16A1-216ENST00000529928 SPATA31D4Q6ZUB0 917 aa17.92■□□□□ 0.46
COL16A1-216ENST00000529928 FERMT3Q86UX7 667 aa17.92■□□□□ 0.46
COL16A1-216ENST00000529928 PALB2Q86YC2 1186 aa17.92■□□□□ 0.46
COL16A1-216ENST00000529928 C4orf19Q8IY42 314 aa17.92■□□□□ 0.46
COL16A1-216ENST00000529928 RIN2Q8WYP3 895 aaPredicted RBP17.92■□□□□ 0.46
COL16A1-216ENST00000529928 COLEC11Q9BWP8 271 aa17.92■□□□□ 0.46
COL16A1-216ENST00000529928 EIF2AQ9BY44 585 aaKnown RBP17.92■□□□□ 0.46
COL16A1-216ENST00000529928 NT5C3AQ9H0P0 336 aa17.92■□□□□ 0.46
COL16A1-216ENST00000529928 KCNMB3Q9NPA1 279 aa17.92■□□□□ 0.46
COL16A1-216ENST00000529928 BMP2KQ9NSY1 1161 aaPredicted RBP17.92■□□□□ 0.46
COL16A1-216ENST00000529928 WRAP73Q9P2S5 460 aaPredicted RBP17.92■□□□□ 0.46
COL16A1-216ENST00000529928 ANHXE9PGG2 379 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 CPLX1O14810 134 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 TGM5O43548 720 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 TSPAN1O60635 241 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 DCNP07585 359 aaKnown RBP17.91■□□□□ 0.46
COL16A1-216ENST00000529928 SCNN1GP51170 649 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 CREMQ03060 361 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 MXD4Q14582 209 aaPredicted RBP17.91■□□□□ 0.46
COL16A1-216ENST00000529928 NPY5RQ15761 445 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 USP41Q3LFD5 358 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 GET4Q7L5D6 327 aaPredicted RBP17.91■□□□□ 0.46
COL16A1-216ENST00000529928 KIAA2013Q8IYS2 634 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 HACE1Q8IYU2 909 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 RMDN1Q96DB5 314 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 ZFP42Q96MM3 310 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 LXNQ9BS40 222 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 PRKD2Q9BZL6 878 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 RNF39Q9H2S5 420 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 SLC2A4RGQ9NR83 387 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 DLGAP2Q9P1A6 1054 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 FNIP2Q9P278 1114 aa17.91■□□□□ 0.46
COL16A1-216ENST00000529928 ZFP37Q9Y6Q3 630 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms