RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 RNF207Q6ZRF8 634 aa6.1□□□□□ -1.43
C11orf88-204ENST00000529661 LYSMD2Q8IV50 215 aa6.1□□□□□ -1.43
C11orf88-204ENST00000529661 CMTM4Q8IZR5 234 aa6.1□□□□□ -1.43
C11orf88-204ENST00000529661 RSAD2Q8WXG1 361 aa6.1□□□□□ -1.43
C11orf88-204ENST00000529661 EAF2Q96CJ1 260 aaPredicted RBP6.1□□□□□ -1.43
C11orf88-204ENST00000529661 CAMKK2Q96RR4 588 aa6.1□□□□□ -1.43
C11orf88-204ENST00000529661 EPC1Q9H2F5 836 aa6.1□□□□□ -1.43
C11orf88-204ENST00000529661 GEMIN8Q9NWZ8 242 aaKnown RBP6.1□□□□□ -1.43
C11orf88-204ENST00000529661 EDARQ9UNE0 448 aa6.1□□□□□ -1.43
C11orf88-204ENST00000529661 GIT1Q9Y2X7 761 aa6.1□□□□□ -1.43
C11orf88-204ENST00000529661 E2F8A0AVK6 867 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 MTSS1O43312 755 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 TSPAN6O43657 245 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 PRAMEF4O60810 478 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 ACRV1P26436 265 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 ZXDAP98168 799 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 KLF1Q13351 362 aaPredicted RBP6.09□□□□□ -1.43
C11orf88-204ENST00000529661 SPIDRQ14159 915 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 FSCN1Q16658 493 aaKnown RBP6.09□□□□□ -1.43
C11orf88-204ENST00000529661 ANKRD35Q8N283 1001 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 MB21D1Q8N884 522 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 OR5M3Q8NGP4 307 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 TGFBRAP1Q8WUH2 860 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 TSR2Q969E8 191 aaKnown RBP6.09□□□□□ -1.43
C11orf88-204ENST00000529661 FUBP3Q96I24 572 aaKnown RBP eCLIP6.09□□□□□ -1.43
C11orf88-204ENST00000529661 C8orf48Q96LL4 319 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 ACAP3Q96P50 834 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 ZNF341Q9BYN7 854 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 SLC13A1Q9BZW2 595 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 HECAQ9UBI9 543 aaPredicted RBP6.09□□□□□ -1.43
C11orf88-204ENST00000529661 CDY2AQ9Y6F7 541 aa6.09□□□□□ -1.43
C11orf88-204ENST00000529661 A0A1W2PR48 441 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 SHTN1A0MZ66 631 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 GOLGA8AA7E2F4 631 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 NRP1O14786 923 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 CYP27B1O15528 508 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 STC2O76061 302 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 C6P13671 934 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 ENPP1P22413 925 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 CASRP41180 1078 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 SCAND1P57086 179 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 PPP2R5AQ15172 486 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 LRRC41Q15345 812 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.08□□□□□ -1.44
C11orf88-204ENST00000529661 FAM214AQ32MH5 1076 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 C1orf210Q8IVY1 113 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 CMIPQ8IY22 773 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 GSPT2Q8IYD1 628 aaKnown RBP6.08□□□□□ -1.44
C11orf88-204ENST00000529661 ELOA2Q8IYF1 753 aaPredicted RBP6.08□□□□□ -1.44
C11orf88-204ENST00000529661 THEMISQ8N1K5 641 aaPredicted RBP6.08□□□□□ -1.44
C11orf88-204ENST00000529661 MSL3Q8N5Y2 521 aaKnown RBP6.08□□□□□ -1.44
C11orf88-204ENST00000529661 MIEF2Q96C03 454 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 HOOK2Q96ED9 719 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 ZNF512Q96ME7 567 aaPredicted RBP6.08□□□□□ -1.44
C11orf88-204ENST00000529661 SMAD5Q99717 465 aaKnown RBP6.08□□□□□ -1.44
C11orf88-204ENST00000529661 ZNF747Q9BV97 191 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 CDH19Q9H159 772 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 CSRNP2Q9H175 543 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 AASDHPPTQ9NRN7 309 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 ZIM2Q9NZV7 527 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 DPP7Q9UHL4 492 aa6.08□□□□□ -1.44
C11orf88-204ENST00000529661 FZD9O00144 591 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 TACR2P21452 398 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 CDK17Q00537 523 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 MFSD5Q6N075 450 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 Q6ZRM9 215 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 TAS1R1Q7RTX1 841 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 ZBTB46Q86UZ6 589 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 SLC41A1Q8IVJ1 513 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 CHPFQ8IZ52 775 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 IL17DQ8TAD2 202 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 LMBR1Q8WVP7 490 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 FAXDC2Q96IV6 333 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 TCF7L1Q9HCS4 588 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 C14orf119Q9NWQ9 140 aa6.07□□□□□ -1.44
C11orf88-204ENST00000529661 ABLIM3O94929 683 aa6.06□□□□□ -1.44
C11orf88-204ENST00000529661 RBP3P10745 1247 aa6.06□□□□□ -1.44
C11orf88-204ENST00000529661 GNAT2P19087 354 aa6.06□□□□□ -1.44
C11orf88-204ENST00000529661 CCT2P78371 535 aaKnown RBP6.06□□□□□ -1.44
C11orf88-204ENST00000529661 KRT85P78386 507 aa6.06□□□□□ -1.44
C11orf88-204ENST00000529661 DUSP2Q05923 314 aa6.06□□□□□ -1.44
C11orf88-204ENST00000529661 PIN1Q13526 163 aaPredicted RBP6.06□□□□□ -1.44
C11orf88-204ENST00000529661 CNGB1Q14028 1251 aaPredicted RBP6.06□□□□□ -1.44
C11orf88-204ENST00000529661 RRP1BQ14684 758 aaKnown RBP6.06□□□□□ -1.44
C11orf88-204ENST00000529661 UBE3CQ15386 1083 aa6.06□□□□□ -1.44
C11orf88-204ENST00000529661 PTPN21Q16825 1174 aa6.06□□□□□ -1.44
C11orf88-204ENST00000529661 PGBD4Q96DM1 585 aa6.06□□□□□ -1.44
C11orf88-204ENST00000529661 PLEKHG4BQ96PX9 1271 aa6.06□□□□□ -1.44
C11orf88-204ENST00000529661 GPR87Q9BY21 358 aa6.06□□□□□ -1.44
C11orf88-204ENST00000529661 RTFDC1Q9BY42 306 aaPredicted RBP6.06□□□□□ -1.44
C11orf88-204ENST00000529661 QRSL1Q9H0R6 528 aaKnown RBP6.06□□□□□ -1.44
C11orf88-204ENST00000529661 TMPRSS5Q9H3S3 457 aa6.06□□□□□ -1.44
C11orf88-204ENST00000529661 TRIM75PA6NK02 468 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 PLSCR1O15162 318 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 MFAP3LO75121 409 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 RFPL1O75677 317 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 IPO13O94829 963 aaKnown RBP6.05□□□□□ -1.44
C11orf88-204ENST00000529661 CFBP00751 764 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 C1SP09871 688 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 LTA4HP09960 611 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms