RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 DRP2Q13474 957 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 COL9A3Q14050 684 aaPredicted RBP10.09□□□□□ -0.79
VPS11-203ENST00000529545 TARBP2Q15633 366 aaKnown RBP10.09□□□□□ -0.79
VPS11-203ENST00000529545 PHLDB3Q6NSJ2 640 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 DHX32Q7L7V1 743 aaKnown RBP10.09□□□□□ -0.79
VPS11-203ENST00000529545 MIER3Q7Z3K6 550 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 ZNF280BQ86YH2 543 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 C1orf210Q8IVY1 113 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 RSAD2Q8WXG1 361 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 PHKBQ93100 1093 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 BORCS6Q96GS4 357 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 SHDQ96IW2 340 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 CCDC136Q96JN2 1154 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 NLRP4Q96MN2 994 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 RPS6KC1Q96S38 1066 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 VN1R3Q9BXE9 311 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 RHOBTB2Q9BYZ6 727 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 RSAD1Q9HA92 442 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 ARHGEF3Q9NR81 526 aa10.09□□□□□ -0.79
VPS11-203ENST00000529545 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.09□□□□□ -0.79
VPS11-203ENST00000529545 EP300Q09472 2414 aaPredicted RBP10.09□□□□□ -0.79
VPS11-203ENST00000529545 WDR87Q6ZQQ6 2873 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 MYO15AQ9UKN7 3530 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 MEIS3P2A8K0S8 358 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 DDX11L8A8MPP1 907 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 NRP1O14786 923 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 MSH4O15457 936 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 KINO60870 393 aaKnown RBP10.08□□□□□ -0.8
VPS11-203ENST00000529545 LILRB3O75022 631 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 N4BP1O75113 896 aaKnown RBP10.08□□□□□ -0.8
VPS11-203ENST00000529545 MAFO75444 373 aaPredicted RBP10.08□□□□□ -0.8
VPS11-203ENST00000529545 DDHD2O94830 711 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 DCNP07585 359 aaKnown RBP10.08□□□□□ -0.8
VPS11-203ENST00000529545 SP9P0CG40 484 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 SDHBP21912 280 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 GLUD2P49448 558 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 USP11P51784 963 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 EXOSC10Q01780 885 aaKnown RBP10.08□□□□□ -0.8
VPS11-203ENST00000529545 UGCGQ16739 394 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 DCLRE1AQ6PJP8 1040 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 AGMOQ6ZNB7 445 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 EXOC8Q8IYI6 725 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 CNNM3Q8NE01 707 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 CCDC148Q8NFR7 591 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 FEZF2Q8TBJ5 459 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 GPR152Q8TDT2 470 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 HDAC7Q8WUI4 952 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 SLC5A5Q92911 643 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 LENG9Q96B70 501 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 TCEANC2Q96MN5 208 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 MYADMQ96S97 322 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 ESYT1Q9BSJ8 1104 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 HERC2P3Q9BVR0 1158 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 UNC45AQ9H3U1 944 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 PLEKHA4Q9H4M7 779 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 UBN1Q9NPG3 1134 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 VPS13AQ96RL7 3174 aa10.08□□□□□ -0.8
VPS11-203ENST00000529545 IGKV6-21A0A0C4DH24 114 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 TEX28O15482 410 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 GAS2O43903 313 aaKnown RBP10.07□□□□□ -0.8
VPS11-203ENST00000529545 POMCP01189 267 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 HMGB1P09429 215 aaKnown RBP10.07□□□□□ -0.8
VPS11-203ENST00000529545 MYBP10242 640 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 LAMP2P13473 410 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 CDC27P30260 824 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 ADD1P35611 737 aaKnown RBP10.07□□□□□ -0.8
VPS11-203ENST00000529545 OR1G1P47890 313 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 KRT32Q14532 448 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 MRPL10Q7Z7H8 261 aaKnown RBP10.07□□□□□ -0.8
VPS11-203ENST00000529545 GPR161Q8N6U8 529 aaKnown RBP10.07□□□□□ -0.8
VPS11-203ENST00000529545 SLC7A3Q8WY07 619 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 DDX12PQ92771 950 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 SECISBP2LQ93073 1101 aaKnown RBP10.07□□□□□ -0.8
VPS11-203ENST00000529545 C22orf23Q9BZE7 217 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
VPS11-203ENST00000529545 AGPAT5Q9NUQ2 364 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 DLL3Q9NYJ7 618 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 NCDNQ9UBB6 729 aa10.07□□□□□ -0.8
VPS11-203ENST00000529545 PRG3Q9Y2Y8 225 aaPredicted RBP10.07□□□□□ -0.8
VPS11-203ENST00000529545 ZFP37Q9Y6Q3 630 aaPredicted RBP10.07□□□□□ -0.8
VPS11-203ENST00000529545 BHMG1C9JSJ3 638 aaPredicted RBP10.06□□□□□ -0.8
VPS11-203ENST00000529545 PRPF3O43395 683 aaKnown RBP10.06□□□□□ -0.8
VPS11-203ENST00000529545 B4GALT3O60512 393 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 DKC1O60832 514 aaKnown RBP eCLIP10.06□□□□□ -0.8
VPS11-203ENST00000529545 RFPL2O75678 378 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 C1RP00736 705 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 SPATA31D3P0C874 917 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 ITGA4P13612 1032 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 NCBP1Q09161 790 aaKnown RBP10.06□□□□□ -0.8
VPS11-203ENST00000529545 NBR1Q14596 966 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 RSPO4Q2I0M5 234 aaPredicted RBP10.06□□□□□ -0.8
VPS11-203ENST00000529545 KIAA0319Q5VV43 1072 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 SPATA31D4Q6ZUB0 917 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 GET4Q7L5D6 327 aaPredicted RBP10.06□□□□□ -0.8
VPS11-203ENST00000529545 SRGAP1Q7Z6B7 1085 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 PALB2Q86YC2 1186 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 KSR1Q8IVT5 923 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 DCLK2Q8N568 766 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 PJA1Q8NG27 643 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 SH2D3AQ9BRG2 576 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms