RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 RNF39Q9H2S5 420 aa14.45□□□□□ -0.1
CPSF1-204ENST00000529288 UBN1Q9NPG3 1134 aa14.45□□□□□ -0.1
CPSF1-204ENST00000529288 DBR1Q9UK59 544 aaKnown RBP14.45□□□□□ -0.1
CPSF1-204ENST00000529288 IPPQ9Y573 584 aa14.45□□□□□ -0.1
CPSF1-204ENST00000529288 C2CD4DB7Z1M9 353 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 NPTXRO95502 500 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 LIG1P18858 919 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 GLRA2P23416 452 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 AXLP30530 894 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 ARL2P36404 184 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 MLH1P40692 756 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 RARRES1P49788 294 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 SIGLEC14Q08ET2 396 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 GNL2Q13823 731 aaKnown RBP14.44□□□□□ -0.1
CPSF1-204ENST00000529288 PTPN14Q15678 1187 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 ZNF174Q15697 407 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 TMEM132AQ24JP5 1023 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 SLC22A17Q8WUG5 538 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 C8orf76Q96K31 380 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 KLHL5Q96PQ7 755 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 CSRNP2Q9H175 543 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 GPRC5CQ9NQ84 441 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 MRPL17Q9NRX2 175 aaKnown RBP14.44□□□□□ -0.1
CPSF1-204ENST00000529288 DZANK1Q9NVP4 752 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 PARP2Q9UGN5 583 aa14.44□□□□□ -0.1
CPSF1-204ENST00000529288 ARL5CA6NH57 179 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 LRRIQ4A6NIV6 560 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 B4GALT5O43286 388 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 NR1I2O75469 434 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 LYPLA2O95372 231 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 CNPP09543 421 aaKnown RBP14.43□□□□□ -0.1
CPSF1-204ENST00000529288 ARF4P18085 180 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-204ENST00000529288 AKAP5P24588 427 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 SCNN1GP51170 649 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 NHLH1Q02575 133 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 MBTD1Q05BQ5 628 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 ST3GAL1Q11201 340 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 IER5LQ5T953 404 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 TAS1R1Q7RTX1 841 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 PPFIBP1Q86W92 1011 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 HACE1Q8IYU2 909 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 KREMEN2Q8NCW0 462 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 CCDC51Q96ER9 411 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 ZFP42Q96MM3 310 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 MTMR9Q96QG7 549 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 MIOSQ9NXC5 875 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 KLK14Q9P0G3 267 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 LIMCH1Q9UPQ0 1083 aa14.43□□□□□ -0.1
CPSF1-204ENST00000529288 URODP06132 367 aa14.42□□□□□ -0.1
CPSF1-204ENST00000529288 KIAA1841Q6NSI8 718 aa14.42□□□□□ -0.1
CPSF1-204ENST00000529288 BMP8AQ7Z5Y6 402 aa14.42□□□□□ -0.1
CPSF1-204ENST00000529288 CATSPER3Q86XQ3 398 aa14.42□□□□□ -0.1
CPSF1-204ENST00000529288 FBXL6Q8N531 539 aa14.42□□□□□ -0.1
CPSF1-204ENST00000529288 TDRD5Q8NAT2 981 aaKnown RBP14.42□□□□□ -0.1
CPSF1-204ENST00000529288 FAM184AQ8NB25 1140 aa14.42□□□□□ -0.1
CPSF1-204ENST00000529288 FEZF2Q8TBJ5 459 aa14.42□□□□□ -0.1
CPSF1-204ENST00000529288 RABGGTAQ92696 567 aa14.42□□□□□ -0.1
CPSF1-204ENST00000529288 NXF3Q9H4D5 531 aaKnown RBP14.42□□□□□ -0.1
CPSF1-204ENST00000529288 LIMD1Q9UGP4 676 aa14.42□□□□□ -0.1
CPSF1-204ENST00000529288 IRAK3Q9Y616 596 aa14.42□□□□□ -0.1
CPSF1-204ENST00000529288 WDR81Q562E7 1941 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 MED24O75448 989 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 ASGR2P07307 311 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 POU5F1BQ06416 359 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 PCBP1Q15365 356 aaKnown RBP eCLIP14.41□□□□□ -0.1
CPSF1-204ENST00000529288 AMHR2Q16671 573 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 ZBTB8OSQ8IWT0 167 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 COLGALT2Q8IYK4 626 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 ERMNQ8TAM6 284 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 NACC1Q96RE7 527 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 HERC2P3Q9BVR0 1158 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 COLEC11Q9BWP8 271 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 KCNH6Q9H252 994 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 SFXN1Q9H9B4 322 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 TUFT1Q9NNX1 390 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 MARCH5Q9NX47 278 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 STK39Q9UEW8 545 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 GIT1Q9Y2X7 761 aa14.41□□□□□ -0.1
CPSF1-204ENST00000529288 ARHGEF35A5YM69 484 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 F8W810 466 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 PDGFBP01127 241 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-204ENST00000529288 SOD2P04179 222 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 OR52Z1P0C646 297 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 SPATA31C1P0DKV0 1188 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 XRCC6P12956 609 aaKnown RBP eCLIP14.4□□□□□ -0.1
CPSF1-204ENST00000529288 MRE11P49959 708 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 CLCN4P51793 760 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 VCPP55072 806 aaKnown RBP14.4□□□□□ -0.1
CPSF1-204ENST00000529288 MTMR3Q13615 1198 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 SLC27A1Q6PCB7 646 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 POTEGQ6S5H5 508 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 IFNLR1Q8IU57 520 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-204ENST00000529288 GLYCTKQ8IVS8 523 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 PRSS33Q8NF86 280 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 ASIC4Q96FT7 647 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 B3GALT6Q96L58 329 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 RPS6KC1Q96S38 1066 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 SMOC2Q9H3U7 446 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 POLD4Q9HCU8 107 aa14.4□□□□□ -0.1
CPSF1-204ENST00000529288 SSX2IPQ9Y2D8 614 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms