RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-216ENST00000528739 PRIMPOLQ96LW4 560 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 AK8Q96MA6 479 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 DRC1Q96MC2 740 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 GAD1Q99259 594 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 RUSC1Q9BVN2 902 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 KMT5AQ9NQR1 393 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 KLK14Q9P0G3 267 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 DNAJB4Q9UDY4 337 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 FAM50BQ9Y247 325 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 LZTS1Q9Y250 596 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 USP20Q9Y2K6 914 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 FAN1Q9Y2M0 1017 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 CLIC4Q9Y696 253 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 CARNS1A5YM72 827 aa15.76■□□□□ 0.11
CAPN1-216ENST00000528739 STX6O43752 255 aa15.76■□□□□ 0.11
CAPN1-216ENST00000528739 NR1I2O75469 434 aa15.76■□□□□ 0.11
CAPN1-216ENST00000528739 GALTP07902 379 aa15.76■□□□□ 0.11
CAPN1-216ENST00000528739 PLA2G4BP0C869 781 aa15.76■□□□□ 0.11
CAPN1-216ENST00000528739 MARCKSP29966 332 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-216ENST00000528739 AFF1P51825 1210 aaKnown RBP15.76■□□□□ 0.11
CAPN1-216ENST00000528739 EFNA5P52803 228 aa15.76■□□□□ 0.11
CAPN1-216ENST00000528739 PUS10Q3MIT2 529 aaKnown RBP15.76■□□□□ 0.11
CAPN1-216ENST00000528739 FOXD4L5Q5VV16 416 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-216ENST00000528739 CDCA2Q69YH5 1023 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-216ENST00000528739 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
CAPN1-216ENST00000528739 FOXD4L4Q8WXT5 416 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-216ENST00000528739 PNMA5Q96PV4 448 aa15.76■□□□□ 0.11
CAPN1-216ENST00000528739 RPS6KC1Q96S38 1066 aa15.76■□□□□ 0.11
CAPN1-216ENST00000528739 FZD8Q9H461 694 aa15.76■□□□□ 0.11
CAPN1-216ENST00000528739 NXF3Q9H4D5 531 aaKnown RBP15.76■□□□□ 0.11
CAPN1-216ENST00000528739 NGRNQ9NPE2 291 aaKnown RBP15.76■□□□□ 0.11
CAPN1-216ENST00000528739 GIT1Q9Y2X7 761 aa15.76■□□□□ 0.11
CAPN1-216ENST00000528739 UNC80Q8N2C7 3258 aa15.76■□□□□ 0.11
CAPN1-216ENST00000528739 A0A1B0GUA9 196 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 ARL5CA6NH57 179 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 ACKR2O00590 384 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 DDHD2O94830 711 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 CXCL14O95715 111 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 KRT18P05783 430 aaKnown RBP15.75■□□□□ 0.11
CAPN1-216ENST00000528739 SRGAP2BP0DMP2 458 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 IL9P15248 144 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 SSTR3P32745 418 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-216ENST00000528739 LONP1P36776 959 aaKnown RBP15.75■□□□□ 0.11
CAPN1-216ENST00000528739 SLC11A1P49279 550 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 SCNN1GP51170 649 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 RESTQ13127 1097 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 ADAM15Q13444 863 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 SMC1AQ14683 1233 aaKnown RBP15.75■□□□□ 0.11
CAPN1-216ENST00000528739 LLGL2Q6P1M3 1020 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 VPS52Q8N1B4 723 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 SNX21Q969T3 373 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 PRG3Q9Y2Y8 225 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-216ENST00000528739 FNDC1Q4ZHG4 1894 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-216ENST00000528739 ARID2Q68CP9 1835 aa15.75■□□□□ 0.11
CAPN1-216ENST00000528739 NPTX2P47972 431 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 SMTNP53814 917 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-216ENST00000528739 GRIN1Q05586 938 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 DLX2Q07687 328 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-216ENST00000528739 FAM187BQ17R55 369 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 SPECC1Q5M775 1068 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 HYIQ5T013 277 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 C1orf186Q6ZWK4 172 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 APBB1IPQ7Z5R6 666 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-216ENST00000528739 EFHBQ8N7U6 833 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 SYT2Q8N9I0 419 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-216ENST00000528739 IGSF21Q96ID5 467 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 ZFP42Q96MM3 310 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 CDCA3Q99618 268 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-216ENST00000528739 TCHPQ9BT92 498 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 TIPINQ9BVW5 301 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 ZHX3Q9H4I2 956 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 ZSCAN16Q9H4T2 348 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-216ENST00000528739 PDZD7Q9H5P4 517 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 SNTG2Q9NY99 539 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 CD207Q9UJ71 328 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 MTMR6Q9Y217 621 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 GDAQ9Y2T3 454 aa15.74■□□□□ 0.11
CAPN1-216ENST00000528739 NPHP3-ACAD11A0A0J9YXS1 232 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-216ENST00000528739 TTLL13PA6NNM8 815 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 HIDE1A8MVS5 230 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 NRP1O14786 923 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 FSCN2O14926 492 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 SLC16A4O15374 487 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 TXLNAP40222 546 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 MATR3P43243 847 aaKnown RBP eCLIP15.73■□□□□ 0.11
CAPN1-216ENST00000528739 STRN3Q13033 797 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 KARSQ15046 597 aaKnown RBP15.73■□□□□ 0.11
CAPN1-216ENST00000528739 DUSP6Q16828 381 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 ATF7IP2Q5U623 682 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 GPBP1Q86WP2 473 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 TMEM173Q86WV6 379 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-216ENST00000528739 KCTD17Q8N5Z5 321 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 AUTS2Q8WXX7 1259 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 TMEM175Q9BSA9 504 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 MIOSQ9NXC5 875 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 CCDC39Q9UFE4 941 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms