RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 SOD2P04179 222 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 CHGBP05060 677 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 ZSCAN20P17040 1043 aaPredicted RBP8.03□□□□□ -1.12
VPS26B-204ENST00000527586 ELAVL4P26378 380 aaKnown RBP8.03□□□□□ -1.12
VPS26B-204ENST00000527586 PGM5Q15124 567 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 PLCB4Q15147 1175 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 PMS2CLQ68D20 193 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 PKN3Q6P5Z2 889 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 LILRA6Q6PI73 481 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 AGMOQ6ZNB7 445 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 ZNF598Q86UK7 904 aaKnown RBP8.03□□□□□ -1.12
VPS26B-204ENST00000527586 GLYCTKQ8IVS8 523 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 TRAPPC12Q8WVT3 735 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 MED8Q96G25 268 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 PPP1R16BQ96T49 567 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 FAM117AQ9C073 453 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 FSCN3Q9NQT6 498 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 INVSQ9Y283 1065 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 SALL2Q9Y467 1007 aaPredicted RBP8.03□□□□□ -1.12
VPS26B-204ENST00000527586 UTP20O75691 2785 aaKnown RBP8.02□□□□□ -1.13
VPS26B-204ENST00000527586 NF1P21359 2839 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 B4E1Z4 1266 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 CCL16O15467 120 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 B4GALT3O60512 393 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 C1RP00736 705 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 CCND2P30279 289 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 SOX9P48436 509 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 DHPSP49366 369 aaPredicted RBP8.02□□□□□ -1.13
VPS26B-204ENST00000527586 C1orf228Q6PIY5 440 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 POTEHQ6S545 545 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 CMTR1Q8N1G2 835 aaKnown RBP8.02□□□□□ -1.13
VPS26B-204ENST00000527586 SYNPOQ8N3V7 929 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 CAMKK1Q8N5S9 505 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 NANOS1Q8WY41 292 aaKnown RBP8.02□□□□□ -1.13
VPS26B-204ENST00000527586 MSANTD3Q96H12 275 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 PSMG3-AS1Q96PY0 264 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 HHIPQ96QV1 700 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 OSMRQ99650 979 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 HERC2P3Q9BVR0 1158 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 FZD8Q9H461 694 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 ZFP14Q9HCL3 533 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 IL17RBQ9NRM6 502 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 TBC1D13Q9NVG8 400 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 POLR3BQ9NW08 1133 aaPredicted RBP8.02□□□□□ -1.13
VPS26B-204ENST00000527586 GDE1Q9NZC3 331 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 KCNH3Q9ULD8 1083 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 PCDHB15Q9Y5E8 787 aa8.02□□□□□ -1.13
VPS26B-204ENST00000527586 A0A0U1RQF3 1178 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 FAM149AA5PLN7 773 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 SLC38A8A6NNN8 435 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 GSG1L2A8MUP6 293 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 SPATA31C2B4DYI2 1134 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 ZNF263O14978 683 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 XYLBO75191 536 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 GNAI3P08754 354 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 HNRNPA1P09651 372 aaKnown RBP eCLIP8.01□□□□□ -1.13
VPS26B-204ENST00000527586 FCARP24071 287 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 GLUD2P49448 558 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 KPNA1P52294 538 aaPredicted RBP8.01□□□□□ -1.13
VPS26B-204ENST00000527586 MLLT6P55198 1093 aaPredicted RBP8.01□□□□□ -1.13
VPS26B-204ENST00000527586 CCINQ13939 588 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 KIZQ2M2Z5 673 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 GNPTABQ3T906 1256 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 PABPC1LQ4VXU2 614 aaKnown RBP8.01□□□□□ -1.13
VPS26B-204ENST00000527586 PKDCCQ504Y2 493 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 PPM1LQ5SGD2 360 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 C6orf132Q5T0Z8 1188 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 TXNDC11Q6PKC3 985 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 FAM200AQ8TCP9 573 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 CSGALNACT1Q8TDX6 532 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 SSH1Q8WYL5 1049 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 APOL6Q9BWW8 343 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 PUS7LQ9H0K6 701 aaKnown RBP8.01□□□□□ -1.13
VPS26B-204ENST00000527586 ZNF768Q9H5H4 540 aaKnown RBP8.01□□□□□ -1.13
VPS26B-204ENST00000527586 CHST12Q9NRB3 414 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 HCFC1R1Q9NWW0 138 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 KIAA1522Q9P206 1035 aaPredicted RBP8.01□□□□□ -1.13
VPS26B-204ENST00000527586 SEPT3Q9UH03 358 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 MAN2B2Q9Y2E5 1009 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 INPP5FQ9Y2H2 1132 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 MRPS23Q9Y3D9 190 aaKnown RBP8.01□□□□□ -1.13
VPS26B-204ENST00000527586 KAT6AQ92794 2004 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 ATG2BQ96BY7 2078 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 TSC2P49815 1807 aa8.01□□□□□ -1.13
VPS26B-204ENST00000527586 PCNX1Q96RV3 2341 aa8□□□□□ -1.13
VPS26B-204ENST00000527586 SURF6O75683 361 aaKnown RBP8□□□□□ -1.13
VPS26B-204ENST00000527586 HLA-EP13747 358 aa8□□□□□ -1.13
VPS26B-204ENST00000527586 PSMC3P17980 439 aa8□□□□□ -1.13
VPS26B-204ENST00000527586 CRYBB1P53674 252 aaPredicted RBP8□□□□□ -1.13
VPS26B-204ENST00000527586 TLE3Q04726 772 aa8□□□□□ -1.13
VPS26B-204ENST00000527586 NFATC3Q12968 1075 aa8□□□□□ -1.13
VPS26B-204ENST00000527586 PON2Q15165 354 aa8□□□□□ -1.13
VPS26B-204ENST00000527586 LONRF3Q496Y0 759 aa8□□□□□ -1.13
VPS26B-204ENST00000527586 NOMO2Q5JPE7 1267 aa8□□□□□ -1.13
VPS26B-204ENST00000527586 RRP12Q5JTH9 1297 aaKnown RBP8□□□□□ -1.13
VPS26B-204ENST00000527586 GIMAP6Q6P9H5 292 aa8□□□□□ -1.13
VPS26B-204ENST00000527586 MTHFD1LQ6UB35 978 aa8□□□□□ -1.13
VPS26B-204ENST00000527586 STOX1Q6ZVD7 989 aa8□□□□□ -1.13
VPS26B-204ENST00000527586 C11orf74Q86VG3 221 aa8□□□□□ -1.13
VPS26B-204ENST00000527586 TMC8Q8IU68 726 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms