RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 MRGPREQ86SM8 312 aa4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 SMC5Q8IY18 1101 aa4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 IFNL3Q8IZI9 196 aa4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 ANKRD35Q8N283 1001 aa4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 SMCR8Q8TEV9 937 aaPredicted RBP4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 RMDN2Q96LZ7 410 aa4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 CFAP53Q96M91 514 aa4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 BTBD2Q9BX70 525 aa4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 TRIM6Q9C030 488 aaPredicted RBP4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 FAM107BQ9H098 131 aa4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 ZSCAN16Q9H4T2 348 aaPredicted RBP4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 RIC8BQ9NVN3 520 aa4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 Q9UFV3 132 aa4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 SRPK3Q9UPE1 567 aa4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 LRRFIP2Q9Y608 721 aaKnown RBP4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 INSRP06213 1382 aa4.24□□□□□ -1.73
CLNS1A-209ENST00000527299 PTPRCP08575 1304 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 RTEL1-TNFRSF6BF6WH68 1400 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 NCOA1Q15788 1441 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 SETD5Q9C0A6 1442 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 ZSCAN9O15535 394 aaPredicted RBP4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 ATP8B1O43520 1251 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 HTATSF1O43719 755 aaKnown RBP4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 RPS6KA4O75676 772 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 PECAM1P16284 738 aaPredicted RBP4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 ATF4P18848 351 aaPredicted RBP4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 AOAHP28039 575 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 PTGS2P35354 604 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 FLT3P36888 993 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 MRPL12P52815 198 aaKnown RBP4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 RIN1Q13671 783 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 TOB2Q14106 344 aaPredicted RBP4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 MFSD4BQ5TF39 518 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 HHATQ5VTY9 493 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 KANK2Q63ZY3 851 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 STYK1Q6J9G0 422 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 Q6ZRM9 215 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 OTOP2Q7RTS6 562 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 ERC1Q8IUD2 1116 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 IQCF2Q8IXL9 164 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 RTKN2Q8IZC4 609 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 TCP11Q8WWU5 503 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 TEKT1Q969V4 418 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 EXOC4Q96A65 974 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 THOC1Q96FV9 657 aaKnown RBP4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 BAG1Q99933 345 aaPredicted RBP4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 NRDE2Q9H7Z3 1164 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 TRPV5Q9NQA5 729 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 BTBD7Q9P203 1132 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 PTGFRNQ9P2B2 879 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 KIF21BO75037 1637 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 LRPPRCP42704 1394 aaKnown RBP4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 EIF3AQ14152 1382 aaKnown RBP4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 RAB3GAP2Q9H2M9 1393 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 PLEKHH1Q9ULM0 1364 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 PLEKHH2Q8IVE3 1493 aa4.23□□□□□ -1.73
CLNS1A-209ENST00000527299 PTPRGP23470 1445 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 A0A087WUV0 522 aaPredicted RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 EIF3CLB5ME19 914 aaKnown RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 TRAF5O00463 557 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 KIF5CO60282 957 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 RTN2O75298 545 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 MPIG6BO95866 241 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 NBPF7P0C2Y1 421 aaPredicted RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 VCAM1P19320 739 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 ACTN2P35609 894 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 EIF5P55010 431 aaKnown RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 RBM6P78332 1123 aaKnown RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 HDLBPQ00341 1268 aaKnown RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 CD83Q01151 205 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 DEUP1Q05D60 604 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 CCDC15Q0P6D6 951 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 ZSCAN23Q3MJ62 389 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 KCNV1Q6PIU1 500 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 LRSAM1Q6UWE0 723 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 GBP6Q6ZN66 633 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 ZNF662Q6ZS27 426 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 SDCCAG8Q86SQ7 713 aaPredicted RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 GLCCI1Q86VQ1 547 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 MYLK4Q86YV6 388 aaPredicted RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 ANKRD18AQ8IVF6 992 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 ANKRD13AQ8IZ07 590 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 NEK11Q8NG66 645 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 KIAA1524Q8TCG1 905 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 HDAC7Q8WUI4 952 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 HAS1Q92839 578 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 EIF3CQ99613 913 aaKnown RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 THUMPD2Q9BTF0 503 aaKnown RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 UTP14AQ9BVJ6 771 aaKnown RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 AMNQ9BXJ7 453 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 UBXN6Q9BZV1 441 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 TRIM7Q9C029 511 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 RWDD1Q9H446 243 aaPredicted RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 HOMER3Q9NSC5 361 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 MAGEC2Q9UBF1 373 aaPredicted RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 MCM8Q9UJA3 840 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 PACSIN3Q9UKS6 424 aa4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 THRAP3Q9Y2W1 955 aaKnown RBP4.22□□□□□ -1.73
CLNS1A-209ENST00000527299 KDM5BQ9UGL1 1544 aa4.21□□□□□ -1.73
CLNS1A-209ENST00000527299 SHROOM2Q13796 1616 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms