RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 WHAMMQ8TF30 809 aa12.92□□□□□ -0.34
CHMP1B-201ENST00000526991 LMBR1Q8WVP7 490 aa12.92□□□□□ -0.34
CHMP1B-201ENST00000526991 MXRA8Q9BRK3 442 aa12.92□□□□□ -0.34
CHMP1B-201ENST00000526991 PTPN22Q9Y2R2 807 aa12.92□□□□□ -0.34
CHMP1B-201ENST00000526991 CCDC169A6NNP5 214 aa12.92□□□□□ -0.34
CHMP1B-201ENST00000526991 PIK3CDO00329 1044 aa12.92□□□□□ -0.34
CHMP1B-201ENST00000526991 TNFRSF8P28908 595 aa12.92□□□□□ -0.34
CHMP1B-201ENST00000526991 SSTR3P32745 418 aaPredicted RBP12.92□□□□□ -0.34
CHMP1B-201ENST00000526991 PLTPP55058 493 aa12.92□□□□□ -0.34
CHMP1B-201ENST00000526991 TKFCQ3LXA3 575 aa12.92□□□□□ -0.34
CHMP1B-201ENST00000526991 RPUSD2Q8IZ73 545 aaKnown RBP12.92□□□□□ -0.34
CHMP1B-201ENST00000526991 TOPORSQ9NS56 1045 aaPredicted RBP12.92□□□□□ -0.34
CHMP1B-201ENST00000526991 SGPL1O95470 568 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 MAGEA9P43362 315 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 ZNF844Q08AG5 666 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 IFFO1Q0D2I5 559 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 MAPK7Q13164 816 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 PPP2R5CQ13362 524 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 KRT71Q3SY84 523 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 FBXW10Q5XX13 1052 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 MDM1Q8TC05 714 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 C18orf8Q96DM3 657 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 PAGR1Q9BTK6 254 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 STXBP5LQ9Y2K9 1186 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 VWA5AO00534 786 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 CYP26A1O43174 497 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 PTPRAP18433 802 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 LMNB1P20700 586 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 TTC31Q49AM3 519 aaPredicted RBP12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 FAM102BQ5T8I3 360 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 SLC30A5Q8TAD4 765 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 PLEKHO2Q8TD55 490 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 RFFLQ8WZ73 363 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 ZNF668Q96K58 619 aaPredicted RBP12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 SLC38A10Q9HBR0 1119 aa12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 SUCLA2Q9P2R7 463 aaPredicted RBP12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 UTP11Q9Y3A2 253 aaKnown RBP12.91□□□□□ -0.34
CHMP1B-201ENST00000526991 TCRBV7S2A1N4TA0A589 114 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 MYO1FO00160 1098 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 WDR46O15213 610 aaKnown RBP12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 TBC1D12O60347 775 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 HSPA9P38646 679 aaKnown RBP12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 BACE1P56817 501 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 TTLL12Q14166 644 aaPredicted RBP12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 RPAINQ86UA6 219 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 HES6Q96HZ4 224 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 ALG6Q9Y672 507 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 FRMPD4Q14CM0 1322 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 EIF3DO15371 548 aaKnown RBP eCLIP12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 ZBTB48P10074 688 aaPredicted RBP12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 HOXA7P31268 230 aaPredicted RBP12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 SSR1P43307 286 aaKnown RBP12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 SLCO1A2P46721 670 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 KCNJ1P48048 391 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 VAMP7P51809 220 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 CNTN2Q02246 1040 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 CBWD2Q8IUF1 395 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 SYCE1Q8N0S2 351 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 ZNF280CQ8ND82 737 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 DHX38Q92620 1227 aaKnown RBP12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 AGPAT1Q99943 283 aa12.9□□□□□ -0.34
CHMP1B-201ENST00000526991 DDX3YO15523 660 aaKnown RBP12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 CTNND1O60716 968 aaKnown RBP12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 CCNE2O96020 404 aa12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 SHBGP04278 402 aa12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 MAGOHP61326 146 aaKnown RBP12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 PGM5Q15124 567 aa12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 LMBRD2Q68DH5 695 aaPredicted RBP12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 SLC47A2Q86VL8 602 aa12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 CCDC25Q86WR0 208 aa12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 CCDC26Q8TAB7 109 aa12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 RUBCNQ92622 972 aa12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 MAGOHBQ96A72 148 aaKnown RBP12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 PI4K2AQ9BTU6 479 aa12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 CNOT8Q9UFF9 292 aaKnown RBP12.9□□□□□ -0.35
CHMP1B-201ENST00000526991 ZBED4O75132 1171 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 DLATP10515 647 aaKnown RBP12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 DR1Q01658 176 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 IFT88Q13099 833 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 TMEM132BQ14DG7 1078 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 XKR9Q5GH70 373 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 TREML2Q5T2D2 321 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 DAB2IPQ5VWQ8 1189 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 STXBP4Q6ZWJ1 553 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 SLFN11Q7Z7L1 901 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 MTMR14Q8NCE2 650 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 CLMNQ96JQ2 1002 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 PCDHB18PQ96TA0 734 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 KIAA1683Q9H0B3 1180 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 TMBIM4Q9HC24 238 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 DNAJC17Q9NVM6 304 aaKnown RBP12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 NENFQ9UMX5 172 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 BTNL10A8MVZ5 291 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 PPP1R37O75864 691 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 MDH1P40925 334 aaKnown RBP12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 ZNF280AP59817 542 aaPredicted RBP12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 SKOR1P84550 965 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 FKBP1CQ5VVH2 108 aa12.89□□□□□ -0.35
CHMP1B-201ENST00000526991 MCTP2Q6DN12 878 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms