RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 LBHD1Q9BQE6 289 aaPredicted RBP15.04■□□□□ -0
CD44-224ENST00000526669 PDZD7Q9H5P4 517 aa15.04■□□□□ -0
CD44-224ENST00000526669 IL23AQ9NPF7 189 aa15.04■□□□□ -0
CD44-224ENST00000526669 EXOC7Q9UPT5 735 aa15.04■□□□□ -0
CD44-224ENST00000526669 PPP1R3GB7ZBB8 358 aa15.03■□□□□ -0
CD44-224ENST00000526669 N4BP3O15049 544 aa15.03■□□□□ -0
CD44-224ENST00000526669 CLIC2O15247 247 aa15.03■□□□□ -0
CD44-224ENST00000526669 HOXA11P31270 313 aaPredicted RBP15.03■□□□□ -0
CD44-224ENST00000526669 RGS19P49795 217 aa15.03■□□□□ -0
CD44-224ENST00000526669 STX17P56962 302 aa15.03■□□□□ -0
CD44-224ENST00000526669 TYRO3Q06418 890 aa15.03■□□□□ -0
CD44-224ENST00000526669 DSC3Q14574 896 aa15.03■□□□□ -0
CD44-224ENST00000526669 BMT2Q1RMZ1 405 aa15.03■□□□□ -0
CD44-224ENST00000526669 DPCR1Q3MIW9 517 aa15.03■□□□□ -0
CD44-224ENST00000526669 NOTUMQ6P988 496 aa15.03■□□□□ -0
CD44-224ENST00000526669 CNKSR3Q6P9H4 555 aa15.03■□□□□ -0
CD44-224ENST00000526669 ADSSL1Q8N142 457 aa15.03■□□□□ -0
CD44-224ENST00000526669 GUF1Q8N442 669 aaKnown RBP15.03■□□□□ -0
CD44-224ENST00000526669 NOC3LQ8WTT2 800 aaKnown RBP15.03■□□□□ -0
CD44-224ENST00000526669 ADAM2Q99965 735 aa15.03■□□□□ -0
CD44-224ENST00000526669 EIF2AQ9BY44 585 aaKnown RBP15.03■□□□□ -0
CD44-224ENST00000526669 HAPLN2Q9GZV7 340 aa15.03■□□□□ -0
CD44-224ENST00000526669 MYO9BQ13459 2157 aa15.02■□□□□ -0
CD44-224ENST00000526669 TRIM49BA6NDI0 452 aa15.02■□□□□ -0
CD44-224ENST00000526669 PIGRP01833 764 aa15.02■□□□□ -0
CD44-224ENST00000526669 ZSCAN20P17040 1043 aaPredicted RBP15.02■□□□□ -0
CD44-224ENST00000526669 AXLP30530 894 aa15.02■□□□□ -0
CD44-224ENST00000526669 ABCD1P33897 745 aa15.02■□□□□ -0
CD44-224ENST00000526669 MAGEA10P43363 369 aaPredicted RBP15.02■□□□□ -0
CD44-224ENST00000526669 NCBP1Q09161 790 aaKnown RBP15.02■□□□□ -0
CD44-224ENST00000526669 STIM1Q13586 685 aa15.02■□□□□ -0
CD44-224ENST00000526669 STX1AQ16623 288 aa15.02■□□□□ -0
CD44-224ENST00000526669 KNOP1Q1ED39 458 aaKnown RBP15.02■□□□□ -0
CD44-224ENST00000526669 ZNF568Q3ZCX4 644 aa15.02■□□□□ -0
CD44-224ENST00000526669 C11orf57Q6ZUT1 292 aaPredicted RBP15.02■□□□□ -0
CD44-224ENST00000526669 C16orf59Q7L2K0 433 aa15.02■□□□□ -0
CD44-224ENST00000526669 RTN4RL1Q86UN2 441 aaPredicted RBP15.02■□□□□ -0
CD44-224ENST00000526669 RPUSD2Q8IZ73 545 aaKnown RBP15.02■□□□□ -0
CD44-224ENST00000526669 ZSWIM2Q8NEG5 633 aa15.02■□□□□ -0
CD44-224ENST00000526669 NELFBQ8WX92 580 aa15.02■□□□□ -0
CD44-224ENST00000526669 KCNN1Q92952 543 aa15.02■□□□□ -0
CD44-224ENST00000526669 TCHPQ9BT92 498 aa15.02■□□□□ -0
CD44-224ENST00000526669 APOL6Q9BWW8 343 aa15.02■□□□□ -0
CD44-224ENST00000526669 GBP3Q9H0R5 595 aa15.02■□□□□ -0
CD44-224ENST00000526669 KCTD10Q9H3F6 313 aa15.02■□□□□ -0
CD44-224ENST00000526669 SEMA6BQ9H3T3 888 aa15.02■□□□□ -0
CD44-224ENST00000526669 PCIF1Q9H4Z3 704 aa15.02■□□□□ -0
CD44-224ENST00000526669 TMEM206Q9H813 350 aa15.02■□□□□ -0
CD44-224ENST00000526669 ZBBXA8MT70 800 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 H0YGN5 161 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 TGFB1I1O43294 461 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 SCP2P22307 547 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 CYP2J2P51589 502 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 PMS1P54277 932 aaKnown RBP15.01□□□□□ -0.01
CD44-224ENST00000526669 NOLC1Q14978 699 aaKnown RBP eCLIP15.01□□□□□ -0.01
CD44-224ENST00000526669 PCBP1Q15365 356 aaKnown RBP eCLIP15.01□□□□□ -0.01
CD44-224ENST00000526669 SEZ6Q53EL9 994 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 TMEM240Q5SV17 173 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 UBXN11Q5T124 520 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 ARMCX5Q6P1M9 558 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 SLC27A1Q6PCB7 646 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 MPZL3Q6UWV2 235 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 ZNF365Q70YC5 407 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 OTOP2Q7RTS6 562 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 CEP120Q8N960 986 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 POMGNT1Q8WZA1 660 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 APBB2Q92870 758 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 SAAL1Q96ER3 474 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.01□□□□□ -0.01
CD44-224ENST00000526669 ADPGKQ9BRR6 497 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 CBWD1Q9BRT8 395 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 DNAJC25Q9H1X3 360 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 CDT1Q9H211 546 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 TYW1Q9NV66 732 aaKnown RBP15.01□□□□□ -0.01
CD44-224ENST00000526669 TNFSF13BQ9Y275 285 aa15.01□□□□□ -0.01
CD44-224ENST00000526669 A0A1B0GUA9 196 aa15□□□□□ -0.01
CD44-224ENST00000526669 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15□□□□□ -0.01
CD44-224ENST00000526669 GOLGA8IPA6NC78 632 aa15□□□□□ -0.01
CD44-224ENST00000526669 GOLGA8JA6NMD2 632 aa15□□□□□ -0.01
CD44-224ENST00000526669 ABLIM1O14639 778 aa15□□□□□ -0.01
CD44-224ENST00000526669 PSMA7O14818 248 aa15□□□□□ -0.01
CD44-224ENST00000526669 LETM1O95202 739 aaPredicted RBP15□□□□□ -0.01
CD44-224ENST00000526669 KIF20AO95235 890 aa15□□□□□ -0.01
CD44-224ENST00000526669 PROZP22891 400 aa15□□□□□ -0.01
CD44-224ENST00000526669 CCNE1P24864 410 aa15□□□□□ -0.01
CD44-224ENST00000526669 OSTNP61366 133 aa15□□□□□ -0.01
CD44-224ENST00000526669 IKBKEQ14164 716 aa15□□□□□ -0.01
CD44-224ENST00000526669 COBLL1Q53SF7 1204 aa15□□□□□ -0.01
CD44-224ENST00000526669 ZPBP2Q6X784 338 aa15□□□□□ -0.01
CD44-224ENST00000526669 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15□□□□□ -0.01
CD44-224ENST00000526669 THNSL1Q8IYQ7 743 aa15□□□□□ -0.01
CD44-224ENST00000526669 RNF169Q8NCN4 708 aa15□□□□□ -0.01
CD44-224ENST00000526669 LPPQ93052 612 aa15□□□□□ -0.01
CD44-224ENST00000526669 P2RX5Q93086 422 aa15□□□□□ -0.01
CD44-224ENST00000526669 FUCA2Q9BTY2 467 aa15□□□□□ -0.01
CD44-224ENST00000526669 MSTO1Q9BUK6 570 aa15□□□□□ -0.01
CD44-224ENST00000526669 FTHL17Q9BXU8 183 aa15□□□□□ -0.01
CD44-224ENST00000526669 GTPBP4Q9BZE4 634 aaKnown RBP15□□□□□ -0.01
CD44-224ENST00000526669 TRIM6Q9C030 488 aaPredicted RBP15□□□□□ -0.01
CD44-224ENST00000526669 NXF3Q9H4D5 531 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms