RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 AAASQ9NRG9 546 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 LARSQ9P2J5 1176 aaKnown RBP17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 ARHGAP28Q9P2N2 729 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 PCDHB12Q9Y5F1 795 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 ATP6V1DQ9Y5K8 247 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 CNTNAP2Q9UHC6 1331 aa17.87■□□□□ 0.45
SSSCA1-202ENST00000526433 N4BP3O15049 544 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 FAM13AO94988 1023 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 STAT6P42226 847 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 NOMO2Q5JPE7 1267 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 TAS1R3Q7RTX0 852 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 LRRC43Q8N309 656 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 MICALL1Q8N3F8 863 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 MYCT1Q8N699 235 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 KLHL23Q8NBE8 558 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 P2RX5Q93086 422 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 PDZD7Q9H5P4 517 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 RSAD1Q9HA92 442 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 UBN1Q9NPG3 1134 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 PLAGL2Q9UPG8 496 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 INPP5FQ9Y2H2 1132 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 HES2Q9Y543 173 aa17.86■□□□□ 0.45
SSSCA1-202ENST00000526433 GRM6O15303 877 aa17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 ZNF131P52739 623 aa17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 KRT85P78386 507 aa17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 NUCB2P80303 420 aa17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 EEF1DP3Q658K8 133 aa17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 DYMQ7RTS9 669 aa17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 COLGALT1Q8NBJ5 622 aa17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 TMEM161BQ8NDZ6 487 aa17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 LEO1Q8WVC0 666 aaPredicted RBP17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 RSPH1Q8WYR4 309 aa17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 APOL6Q9BWW8 343 aa17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 MRPL9Q9BYD2 267 aaKnown RBP17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 ZHX3Q9H4I2 956 aa17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 PARVGQ9HBI0 331 aa17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 ALG13Q9NP73 1137 aaKnown RBP17.85■□□□□ 0.45
SSSCA1-202ENST00000526433 COL4A4P53420 1690 aaPredicted RBP17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 PHLPP2Q6ZVD8 1323 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 MYMKA6NI61 221 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 ITGB1P05556 798 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 LAG3P18627 525 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 AFF1P51825 1210 aaKnown RBP17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 PTPROQ16827 1216 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 ATF7IP2Q5U623 682 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 KCNT2Q6UVM3 1135 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 HACE1Q8IYU2 909 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 SPPL3Q8TCT6 385 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 URGCPQ8TCY9 931 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 MRPL38Q96DV4 380 aaKnown RBP17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 SPATA32Q96LK8 384 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 ACO2Q99798 780 aaKnown RBP17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 ADPGKQ9BRR6 497 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 NXF3Q9H4D5 531 aaKnown RBP17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 TBC1D13Q9NVG8 400 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 KANSL3Q9P2N6 904 aa17.84■□□□□ 0.45
SSSCA1-202ENST00000526433 H0YCG3 227 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 TBCAO75347 108 aaKnown RBP17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 MAPTP10636 758 aaKnown RBP17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 AKAP5P24588 427 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 NCKAP1LP55160 1127 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 RNASELQ05823 741 aaKnown RBP17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 STRN3Q13033 797 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 E2F4Q16254 413 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 CSPP1Q1MSJ5 1256 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 RESP18Q5W5W9 173 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 HAUS6Q7Z4H7 955 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 IQUBQ8NA54 791 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 DDX12PQ92771 950 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 DNAJC19Q96DA6 116 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 ZNF558Q96NG5 402 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 GAD1Q99259 594 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 TARS2Q9BW92 718 aaKnown RBP17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 MRPL4Q9BYD3 311 aaKnown RBP17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 LMAN2LQ9H0V9 348 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 NRDE2Q9H7Z3 1164 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 FAM13BQ9NYF5 915 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 PARP2Q9UGN5 583 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 TNFSF13BQ9Y275 285 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 GIT1Q9Y2X7 761 aa17.83■□□□□ 0.44
SSSCA1-202ENST00000526433 ARL5CA6NH57 179 aa17.82■□□□□ 0.44
SSSCA1-202ENST00000526433 TRAK2O60296 914 aa17.82■□□□□ 0.44
SSSCA1-202ENST00000526433 POMCP01189 267 aa17.82■□□□□ 0.44
SSSCA1-202ENST00000526433 ZNF280BQ86YH2 543 aa17.82■□□□□ 0.44
SSSCA1-202ENST00000526433 THNSL1Q8IYQ7 743 aa17.82■□□□□ 0.44
SSSCA1-202ENST00000526433 STAMQ92783 540 aa17.82■□□□□ 0.44
SSSCA1-202ENST00000526433 DHX58Q96C10 678 aa17.82■□□□□ 0.44
SSSCA1-202ENST00000526433 SCAND2PQ9GZW5 306 aaPredicted RBP17.82■□□□□ 0.44
SSSCA1-202ENST00000526433 PTPRHQ9HD43 1115 aa17.82■□□□□ 0.44
SSSCA1-202ENST00000526433 MIOSQ9NXC5 875 aa17.82■□□□□ 0.44
SSSCA1-202ENST00000526433 SNTG2Q9NY99 539 aa17.82■□□□□ 0.44
SSSCA1-202ENST00000526433 KLK14Q9P0G3 267 aa17.82■□□□□ 0.44
SSSCA1-202ENST00000526433 INPPL1O15357 1258 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 POLR2DO15514 142 aaKnown RBP17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 FGF18O76093 207 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 DDHD2O94830 711 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 DNAJB1P25685 340 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 PBX3P40426 434 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 ALDH7A1P49419 539 aaKnown RBP17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 BCAR1P56945 870 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms